KEGG   Pseudomonas amygdali: BKM19_028635
Entry
BKM19_028635      CDS       T05354                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg00521  Streptomycin biosynthesis
pamg00523  Polyketide sugar unit biosynthesis
pamg00525  Acarbose and validamycin biosynthesis
pamg00541  O-Antigen nucleotide sugar biosynthesis
pamg01100  Metabolic pathways
pamg01110  Biosynthesis of secondary metabolites
pamg01250  Biosynthesis of nucleotide sugars
Module
pamg_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    BKM19_028635 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    BKM19_028635 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    BKM19_028635 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    BKM19_028635 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    BKM19_028635 (rfbB)
Enzymes [BR:pamg01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     BKM19_028635 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR NAD_binding_10
Other DBs
NCBI-ProteinID: AVB17574
UniProt: A0A2G4DBT6
LinkDB
Position
5858903..5859985
AA seq 360 aa
MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC
DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE
AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVGAWHRTYGLP
VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT
EGEVGETYNIGGHNEQKNIDVVRGICALLNELAPQHPAGIAQYSDLITYVVDRPGHDQRY
AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCRRVQDGSYQGERLGFTDPKDLIA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcgaatactcgttaccgggggcgcaggtttcatcggctctgcactgatccgccacctg
ataaacaacaccgaacacgaagtgctgaacttcgacaaattgacctacgcgggcaacctt
gaatcgttgcagtccattgcgaccgacacgcgctatgagttcgtgcaggcggatatctgc
gatcaggcccgcgtcagtgcggtgctcgaacgctttgcgccgcaggcgatcatgcacctg
gcggctgagtcccacgtcgaccgctccatcgatggcccggccgagttcatccagaccaac
atcgtcggcacctatagcctgctggaagccacgcgcgcctggtggctgaaattgccggaa
gcgcagcgccaggcgttccgcttccaccatatctccactgatgaggtatatggcgacctg
cacggtgtcgatgatctgttcaccgaaaccacgccgtatgcgcccagctcaccttactcg
gcaagcaaggctgcgtccgaccacctggtgggcgcctggcaccgcacctatggcctgcct
gtcgtggtaaccaactgttctaacaactacgggccgttccactttcccgaaaagctcatc
ccgctggtgattctcaacgccctggcgggcaagccgctgccggtgtacggcaatggcctg
caagtgcgcgactggctgtatgtcgaggatcacgcacgagcactgctcaaggtcgtgacc
gaaggtgaagtcggcgagacgtacaacatcggcggtcataacgagcagaaaaacatcgac
gtcgtccgcggtatctgtgcgctgctcaatgagctggccccgcagcatccggcgggcatc
gcgcaatacagcgacctgatcacctacgtggttgaccgtccgggccacgaccagcgctat
gccatcgatgccagcaaaatcgacaacgacctgggctggacgcccgaagagaccttcgag
tccgggctgcgcaagacggtgcagtggtatctggacaacctggactggtgccgcagggtt
caggacggcagttatcagggcgaacgactgggtttcaccgacccaaaggacctgattgcc
tga

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