Paracoccus aminophilus: JCM7686_0328
Help
Entry
JCM7686_0328 CDS
T02792
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pami
Paracoccus aminophilus
Pathway
pami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM7686_0328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pami03019
]
JCM7686_0328
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_0328
Enzymes [BR:
pami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM7686_0328
Messenger RNA biogenesis [BR:
pami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JCM7686_0328
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JCM7686_0328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AGT07437
UniProt:
S5XQU2
LinkDB
All DBs
Position
277153..279174
Genome browser
AA seq
673 aa
AA seq
DB search
MSAAPLLRQVFGFDGFRPGQEEIVEAVAAGRDVLAIMPTGGGKSLCYQLPALMRDGVTVV
ISPLIALIRDQVRALREAGVAAGALTSGNTEEETAAVFEGLRAGELKLLYMAPERLASSG
TLPMLRRAGVTAIAVDEAHCVSQWGHDFRPDYLRIGELRATLNVPLAAFTATADVETRGE
IMRRLFPEAAPLSFLRGFDRPNIHLAFAPKDGPRRQILDFARARDGQSGIVYCGTRAKTE
TLAQALLDAGLPAVAYHGGMEAGPRREVEGRFQREDGLIVVATVAFGMGIDKPDIRWVAH
ADLPRSIEAYYQEIGRAGRDGGPAETMTLYGQEDIRLRRSQIDEGQAPLERKTADHARLN
ALLGLAEAATCRRQYLLGYFGEEAGPCGHCDICNDPPETFDGTEPVRKALSAVLRTGETY
GAGHIIDVLIGNATEKVTQRGHDRLPTFGCGKDIGKLAWQAILRQMLGRDLLRPDPERHG
GLVITEAAHPVLRGEIPVILRRDLIAKARPAPVVRAQVSDEDAQLFAALRAKRRELAEAQ
GAPAYVIFADKTLIEMAATRPMTLDQMARVSGVGAKKLESYGRDFLAVIAGEVPAMHPAR
RALAGSAAGELFDRLLEAQNRLLRGTDGTEKPLSVSTSVLRRIAEDRPRDLARYLDPARF
DRFGEAFAEEIAA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccccccttctgcggcaggtcttcggctttgacggtttccgccccggacag
gaggaaatcgtcgaggcggtggccgctggtcgcgatgttttggcaatcatgccgacgggt
ggcgggaaatctctgtgttatcaactgcctgcgctgatgcgcgatggcgtgaccgtggtc
atctcgccgctgatcgcgctgatccgcgatcaggtccgggctttgcgcgaggccggggtg
gcggctggcgcgctgacctcgggcaataccgaggaagagaccgcggcggtcttcgagggc
ctgcgcgcgggtgagctgaaactgctttatatggcgcccgaacggctggcctccagcggg
acgctgccgatgctgcgccgggcgggggtcactgcaatcgccgtcgacgaggcgcattgc
gtcagccaatggggccatgatttccgccccgattacctgcgcatcggcgagctgcgcgcg
acgctgaacgtgccgctcgcggccttcaccgcgaccgccgatgtcgagacccggggcgag
atcatgcgccgcctctttcccgaggccgcgccgctcagctttctgcgcggctttgatcgc
ccgaacatccaccttgccttcgcgcccaaggacgggccgcgccgccagatcctcgatttc
gcccgcgcccgagacggccagtcgggcatcgtctattgcggcacccgcgccaagaccgag
accctggcgcaggcgctgctcgatgcgggccttccggcggttgcctatcacggcggcatg
gaggccgggccgcgccgcgaggtcgagggccgcttccagcgcgaggatgggctgatcgtc
gtcgcgaccgtggcctttggcatgggcatcgacaagccggacattcgctgggtcgcccat
gccgatctgccgcgctcgatcgaggcctattatcaggaaatcggccgcgccgggcgcgat
ggcggtccggcggaaaccatgacgctttacgggcaggaagacatccgcctgcgccgcagc
cagatcgacgaggggcaggcgccgctggagcgcaagaccgccgatcacgcgcggctgaat
gcgcttctggggctggccgaggcggcgacctgtcggcgccagtatctcttgggctatttc
ggcgaagaggccgggccctgcggccattgcgatatttgcaacgacccgcccgagaccttc
gacgggaccgagccggtccgcaaggcgctctcggccgtgctccgcaccggcgagacttat
ggcgcgggtcatatcatcgacgtgctgatcggcaatgccaccgaaaaggtcacccagcgc
ggccatgaccgcctgccgaccttcggctgcggcaaggatatcggtaagctcgcctggcag
gcgatcctgcgccagatgctcggtcgcgatctgctgcgtcccgatcccgaacgtcacggc
ggtctggtgatcaccgaggccgcccatccggtgctgcgcggcgagatcccggtgatcctg
cgccgcgatctgatcgccaaggcgcgacctgcgccggtggtgcgcgcgcaggtctcggat
gaggatgcgcagctctttgccgccctgcgcgccaagaggcgcgagctagccgaggcgcag
ggcgcgcccgcctatgtcattttcgccgacaagaccctgatcgaaatggccgcgacccgg
ccgatgacgctcgatcagatggcacgggtcagcggggtcggcgcgaagaagctggaaagc
tatggccgcgattttctggcggtgatcgcaggcgaggttccggcgatgcatccggcgcgc
cgggcgctggcgggcagtgcggcgggtgagctgttcgaccgcctgcttgaggcacaaaac
cgtctgctgcgcggcacggatgggacggaaaagccgctctcggtctcgacttcggtgcta
cgccgcatcgccgaggaccggccccgcgatctcgcgcgttatctcgaccccgcgcgcttt
gaccgcttcggcgaggctttcgccgaagagatcgcagcttag
DBGET
integrated database retrieval system