Podospora anserina: PODANSg09509 Help Entry PODANSg09509      CDS       T01048                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pan  Podospora anserina Pathway pan03020   RNA polymerase pan03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pan00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PODANSg09509   09124 Replication and repair    03420 Nucleotide excision repair     PODANSg09509  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pan03021]     PODANSg09509    03400 DNA repair and recombination proteins [BR:pan03400]     PODANSg09509 Enzymes [BR:pan01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PODANSg09509 Transcription machinery [BR:pan03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PODANSg09509 DNA repair and recombination proteins [BR:pan03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PODANSg09509 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R MafB zf-C4pol Motif Other DBs NCBI-GeneID:  6197617 NCBI-ProteinID:  XP_001912461 UniProt:  B2AA31 LinkDB All DBs Position 1 AA seq 1748 aa AA seqDB search MANLIFAHSSAPLRTIQEIQFGLLSPDEIKAMSVAHIVYPETMDETRTKPRDGGLNDPLL GSVDRQFKCKTCTENMSECPGHFGHIELARPVYHPGFIKRTKKLLEIVCHNCSKVLADRS DPAYAAAMKIRDPKTRFKRVWDICKAKRVCDNLAPQKPEDGSYDPNAGPADGGHGGCGNT QPVVRQQALTLYAMVEHKDDEGVKTKEKKVLTPEMTLNIFRRMSEDEMVDIGLNISQARP EWMIITVLPVPPPPVRPSISMDGTGTGMRNEDDLTYKLGDIIRANGNVRQAISEGSPQHI ITDYENLLQYHVATYMDNDIAGQPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFS ARTVITGDANISLDEVGVPRSIARTLTFPETVTPYNIEKLTGYVKNGPNEHPGAKYVIRS DGTRIDLRHHKRAGALQLEYGWKVERHLIDGDFIIFNRQPSLHKESMMGHRVRVMPYSTF RLNLSVTSPYNADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNGPLMGIVQDTL AGVYKLTRRDTFLTKEQVMDVMMWVPDWDGVIPLPAIWKPRPRWTGKQIISMVIPSIINL AMGADGEERDAPLKDEGLLIQQGQLIYGLLTKKSVGAAGGGIIHLCYNELGPSGAMDFLN GCQRVVNYWLLHCGHSIGIGDTIPDDKTIELIEKHINDEKAVVAKLTKMATENQLEALPG MNVRETFENKVSAALNTARDKAGTSTEKSLKDLNNAVTMARSGSKGSSINISQMTALVGQ QIVEGKRIPFGFKYRTLPHFTKDDYSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDT AVKTAETGYIQRRLVKALEDAEAHYDGTVRNSLGDIIQFVYGEDGLDGIAIEKQKVDHMN LNNAKFDKRFRLDVMDETSSAAALDALEYGREMVSDPAVQSLLDEEYEQLLADRKQVREI NRKKKDDDSMQLPLNIGRIIDTAKKLFKVDSTQRSDLTPKDVIPAVQALLARMVVVRGED ELSREADYNATILFKIQIRSRLAFKRLAVEQRLNKLAFDHVLGELENRWSRSMVSPGEMV GVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVAKDIKTPSMVVYLDKER ATQEDAKSMRNLVEHTSLRSVTAMTEIYYDPDITSTVIPEDFDLVESYFLIPDTSDSQPI DSQSRWLLRIMLDRQKMLDKGLRVEDVAAAIKQEYKKDVAVIFSDNNAEEMVVRIRVIRQ NDDKDADGNTIIEDDVMLKRLEKHLLDSCTLRGVEGIERAFLNKTARLLELPDGSQTANK DKEPACEEWYLDTQGTALREVLTVEGVDTTRTYTNDLYQVVDVFGIEAARSALMAELTQV LAFDGSYVNHRHLALLVDVMTYRGSIAAVTRHGINRADTGALMRCSFEETVEILLEAAAV GELDDCRGISENVMLGQMAPMGTGHFEVLLDPKMLETVISDNSRMGLMAGMTIKGNQLEG AATPYDTGSPMADNGYLGGSYSPTMGNFSPIVGNESGGPPGFASEYGGGGYGSSSVNPYA TSPGRPTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPT SPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASP AFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFSPRTPGR AAGSGGDQ NT seq 5247 nt NT seq  +upstreamnt  +downstreamnt atggcgaaccttatcttcgctcactcgagcgcgccgctccggacaattcaggagatccag tttggtctgctgtcgccggatgaaatcaaggccatgagcgtagcccacatcgtctatcct gagactatggatgagacgagaaccaagccacgcgatggtggtctcaacgaccctttactc ggctcagtagaccgacaattcaaatgcaagacatgtaccgaaaacatgtcagagtgccca gggcatttcggacacatcgaactggcccgcccagtctaccatccaggattcatcaaacgg acaaagaaattgctggaaatcgtctgccataactgtagcaaggttttggccgatagaagt gatcctgcttacgccgcggctatgaagattcgcgaccccaaaactcgcttcaagcgtgtg tgggacatctgcaaagcgaagcgcgtttgcgataaccttgcgccgcagaaacccgaagat ggctcgtatgatcccaacgcgggcccagctgatggtggtcacggaggttgcggcaatacc cagcccgttgtgcgtcagcaggctctgactctgtatgccatggtcgagcacaaggacgac gaaggtgtgaagaccaaggagaagaaggttcttacacccgagatgactctcaacatcttc cgtcgcatgtcagaggacgagatggtcgatatcggtctcaacatttcccaagcccgtccc gagtggatgatcatcacagttcttcccgtgcccccgccgccagtgcgtcctagcatttct atggacggtactggcaccggtatgcgcaacgaagacgatttgacgtacaaacttggcgat atcattcgcgccaacggcaacgtcagacaggccatctcagaaggctcaccccagcacatc atcacggattatgagaatcttctccagtaccacgtcgccacctatatggacaacgacatt gctggtcagccacaagctctgcaaaagagcggccgtccagtgaaagccatccgcgcgcgt ctcaagggcaaagaaggtcgtctgagaggtaacttgatgggaaagcgagtcgacttctcg gcccgtactgtcatcacgggtgatgccaacatttctctggatgaagtcggtgtcccacgc agcattgcccgcaccctcaccttccccgagaccgtcactccctacaacattgagaagctc accggctatgtcaaaaatgggccgaacgaacatcccggtgccaagtacgtaatcaggtcg gacgggacgcgcatcgatcttcgccatcacaagcgtgcgggagctctgcagctggagtac gggtggaaagtcgagcgtcatttgatcgacggtgactttatcatcttcaaccgtcagccc tctctccacaaggagtccatgatgggtcacagagtgcgcgtcatgccctactctactttc cgcctgaatttgtccgtcacatcgccctacaacgccgatttcgacggtgatgaaatgaac ttgcacgttccgcagaccgaggagacacgtgctgaagtcaaggagctgtgcatggttcct ctcaacatcgtctctccccagcgtaacggcccgctcatgggtatcgtccaggatacactg gccggcgtatacaagctcactcgtcgcgacaccttcctcaccaaagaacaggtgatggac gtcatgatgtgggtcccagactgggatggagtcattccccttcctgctatctggaagcct aggccccggtggactggcaagcagatcatcagcatggtgattcccagcattatcaacctt gccatgggtgccgatggcgaagagagggacgccccgcttaaggacgagggtctcctgatt cagcaaggtcagctcatctacggcttgctcaccaagaagagtgtcggtgctgctggaggc ggcatcattcatctgtgctacaatgagttgggcccctccggtgccatggacttcttgaac gggtgccagagagttgtcaactattggcttctccactgcggccacagcattggtatcggt gacaccattcccgatgacaagaccattgagctcattgaaaagcacatcaatgacgagaag gccgtggtcgccaagcttaccaagatggccactgaaaaccagctcgaggctctcccgggt atgaacgtccgtgagacgttcgagaacaaggtgtcggctgccttgaatacggctcgtgac aaggccggtacgtctaccgagaagagtttgaaggatctcaacaacgccgtcaccatggct cgttcgggttccaagggctcttccatcaatatctcccaaatgacagcgttggtcggtcag cagattgtcgaaggaaagcgcattcccttcggcttcaaataccgcaccctccctcatttc accaaggatgattactcccccgaggctcgtggtttcgtcgagaactcgtatctccgtggc ttgactccttcggaatttttcttccacgccatggctggtagagaaggtttgatcgatact gcagtcaagacagccgagaccggttacattcagcgtcgcttggtcaaggctcttgaagac gctgaggcgcattacgatggtacggtgcgcaactcgctgggtgatatcattcagttcgtg tacggtgaggatggccttgatggtattgccattgaaaagcaaaaggtcgaccacatgaac ttgaacaacgccaagttcgacaagcgcttccgtctcgacgtgatggacgagacaagctct gctgccgctctggacgccctggaatatggccgagagatggtcagcgatcctgccgtccag tcgcttttggatgaggaatatgagcagcttcttgccgaccggaagcaagtccgtgaaatc aaccgcaagaagaaggacgatgacagcatgcagctgcctctcaacattggccgtattatt gatactgccaagaagctcttcaaggttgacagcacccagcgcagcgacctgactcccaag gatgtcattcctgctgtgcaggccttgcttgctcgcatggtggtagttagaggcgaggat gaattgtccagagaagctgattacaacgccaccattctcttcaagattcagattcgctct cgtcttgcgttcaagcgcctggctgttgagcagcggctcaacaagctcgccttcgaccat gttcttggtgagctcgaaaaccgttggtcccggtccatggtctctcctggtgagatggtt ggcgtgttggctgcccagtccattggtgagcctgccacccagatgacgttgaacaccttc catttcgccggtgtttcttctaagaacgtcaccctcggtgtaccgcgtctcaaggaaatc ctcaacgttgccaaggacatcaagactccgtccatggttgtctaccttgacaaggagaga gctacgcaagaagacgccaagtcgatgcgtaacttggttgagcacaccagtctgagatcc gtcacagccatgactgagatctactacgaccccgatatcacttccactgtcatccccgag gatttcgatctcgtcgagtcctacttccttattcccgacacctctgactcgcagcctatc gatagtcaatcccgctggctactcagaatcatgctcgatcgtcaaaagatgcttgacaag ggcttgcgtgtggaggatgttgccgctgctatcaaacaggagtacaagaaggatgtcgcg gttattttcagtgacaacaacgccgaggagatggttgttcgtatccgcgtcattcgccag aacgatgacaaggatgctgacggtaacactatcatcgaggatgatgttatgctgaagcgt ctggagaagcatctgcttgactcttgtactctccgtggcgttgaaggcatcgagcgtgct ttcctgaacaagaccgccagattgctcgaactccccgacggatcgcaaacggccaacaag gacaaggagccagcctgcgaggagtggtatcttgatacccagggtacggcccttagagag gtcttgacggttgaaggtgttgacactactcgcacctacaccaacgacttgtaccaggtt gtcgatgtgtttggaatcgaagctgctcgctcggctctcatggctgagttgacgcaagtg cttgccttcgacggttcctatgtcaaccatcgccatttggctctattggtcgatgtcatg acctatcgcggcagcattgctgccgttactcgtcatggtatcaatcgcgctgatactggt gcgctcatgcgttgctctttcgaggagactgtcgagattcttctcgaagccgctgcggtt ggtgagcttgacgactgccgcggtatttccgagaacgtcatgcttggtcagatggcgccc atgggcactggtcactttgaggttcttctcgaccccaagatgctggagactgtcatctct gataactctcgcatgggtctcatggctggcatgaccatcaagggtaaccagcttgagggt gccgcgaccccctacgacacaggctcacctatggctgataacggctaccttggcgggtct tactccccaaccatgggtaacttctcccctattgtgggcaatgaatccggtggcccgcct gggttcgcatctgaatacggtggtggtgggtatggttccagctcggtcaacccgtatgct acaagccctgggcgacctacgagtcccttcactacctccccgacgtcgcctttcagctac ggttactccccgacgtcgcctgctgctgggtattcccccacctctccgctcatcgacgcc ggtggtcggtttgcttcgagccctcagttcagcccgtcctcgccgtctttctcgccaacg tcgcctatgcttcgtcctgggagcccaacaagccccagctacagcccgacttcgccgagc tattctcctgcgtctccggctgccacccgtcactactccccgacatcgcccgcgcagttc cagtcaccgacctcgccgtcgtactcgccgacgagtccgagctacagcccagcgtcccct gcgttccaggccacgtcgccatcatactcgccggcgtcgcccaactggtcgcccacgtcg ccagatgcttactcgccgacaagccccaccttccagcgctctcccgggcagcaaatgtct ccaaccagccctgggtattcaccaacgtctcctagcttctctcccagaacgccgggtcgc gccgcgggaagtggtggtgatcaatag

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