Pandoraea sp. XY-2: DRB87_02050
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Entry
DRB87_02050 CDS
T06086
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00280
Valine, leucine and isoleucine degradation
pand01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DRB87_02050
Enzymes [BR:
pand01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
DRB87_02050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
MCC_alpha_BT
ATP-grasp_3
GCV_H
GARS_A
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
QBC30372
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All DBs
Position
complement(460291..462312)
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AA seq
673 aa
AA seq
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MFDKILIANRGEIACRVAATAARLGIRTVAVYSDADAHAKHVAVCDEAVHVGGAAARESY
LRIDAIINAAKATGAQAIHPGYGFLSENEAFAAACHEAGIVFIGPPVGAIHAMGSKSAAK
TLMEGAAVPLVPGYHGDNQDAAFLHERADEIGYPVLLKASAGGGGKGMRVVERSSAFRAA
LTSCQREAASSFGDERVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCSVQRRHQKVLE
EAPAPGMTDERRRAMGEAACNAARAVGYVGAGTVEFIANQDGSFYFMEMNTRLQVEHPVT
EMITGLDLVEWQLRVAAGEVLPRKQDALRIQGHALEARIYAENPDNNFLPSTGTLCTLRP
PAAVQFEIGSADAPAAVRIDSGVREGDTISPFYDPMIAKLIVWGRDRDEALARMRRALGQ
YRVVGVQTNIAFLGRLVASEPFAAADLDTGLIERHRDTLFPAAAPVPATTLALAVAAQLA
RETVIGRRKYQDSIDHHSPWQLATGWRLNGDYQRTLAFDHGETRLSVLLTSGPQASTLTV
DGQTYPYRYAHDAGVYRVTLGDRRVQGHVDFEHDAAHVFADGQSWTLRWHDPLTQAGAQE
GGEGRLTAPMPGKVIAVLAPAGTKVEKGAPLLVMEAMKMEHTISAPADGEIEEVLFAVGD
QVPEGAQLLAFKR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagatcctcatcgccaaccgcggcgaaatcgcctgccgcgtggccgccacg
gccgcacggctgggcattcgcacggtggccgtctattccgacgccgacgcgcacgccaag
catgtcgccgtgtgcgacgaagcggtgcacgtgggtggcgccgccgcgcgcgagagctat
ctgcgcatcgatgccatcatcaacgccgccaaggccaccggcgcccaggccatccacccg
ggctacggcttcctgtccgagaacgaagcctttgccgccgcgtgtcacgaggccggcatc
gtcttcattggcccgccggtcggcgccattcatgcgatgggcagcaagagcgccgcgaaa
accctgatggaaggcgccgcagtgccgctggtgccgggctaccacggcgacaatcaagac
gccgcgttcctgcacgagcgcgccgacgagatcggctaccccgtgctgctcaaggccagc
gcgggcggcggcggcaagggcatgcgcgtggttgagcgcagttcggcgtttcgcgccgcg
ctcacgtcctgccagcgcgaagccgccagcagcttcggcgacgagcgcgtgttggtcgaa
aagtacctgacgcgtccgcgccatatcgagattcaggtatttgccgacacgcacggcaac
tgcgtctatctgttcgagcgcgactgctcggtgcagcgccgtcaccagaaggtcctggaa
gaagcccccgccccgggcatgaccgacgagcgtcgtcgcgccatgggcgaagccgcctgt
aatgccgcgcgggccgtgggctacgtcggcgcgggcacggtcgagttcatcgccaatcag
gacggctctttctacttcatggagatgaacacgcgcctgcaggtcgagcatccggtcacg
gaaatgatcaccgggctcgatctggtcgaatggcaattgcgcgtggcggcgggcgaagtg
ttgccgcgcaagcaggacgcgttgcgcattcaggggcatgcgctcgaagcccgtatctac
gccgagaatccggataacaacttcctgccgtcgacgggcacgctctgcacgctgcgtccg
cccgcagcggtccagttcgagatcggcagcgccgacgcaccggccgccgtgcgcatcgac
tcgggcgtgcgcgaaggcgacaccatctcgcccttctacgatccgatgatcgccaagctg
atcgtgtggggtcgggaccgcgacgaagcactcgcccgcatgcgacgcgcgctgggccag
tatcgcgtggtgggcgtgcagacgaacatcgcgttcctcggacgcctggtcgccagcgag
ccgttcgcggcggccgatctcgacaccgggctgatcgagcgtcatcgcgacacgctgttc
ccggccgccgccccggtaccggcgaccacgctggcactggccgtcgcggcgcagctggcc
cgcgaaaccgtgatcggccgccgcaaatatcaggacagcatcgatcaccactcgccgtgg
cagctcgccaccgggtggcgcctgaacggcgactaccagcgcaccctcgccttcgatcac
ggcgagacgcggctgtcggttctcctcacgagcgggccgcaggcgagcacgctcaccgtg
gacgggcagacgtacccgtatcgctacgcccacgacgccggggtgtatcgcgtgacgctc
ggcgatcgccgcgttcaagggcatgtcgacttcgagcacgacgccgcgcacgtcttcgcc
gacggtcagtcctggacgctgcgctggcacgatccgctgacacaagcgggggcgcaggaa
gggggcgaggggcggctgacggcgccgatgccgggcaaggtcatcgccgtgctcgcgccc
gccggtacgaaggtcgagaagggcgcgccgctgctcgtgatggaagcgatgaagatggag
cacaccatcagcgcacccgcggacggtgaaatcgaagaggtgctgttcgccgtcggcgac
caggtgccggaaggcgcccagttgctggcgttcaagcgatag
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