Pandoraea sp. XY-2: DRB87_13290
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Entry
DRB87_13290 CDS
T06086
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00020
Citrate cycle (TCA cycle)
pand00785
Lipoic acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
pand01210
2-Oxocarboxylic acid metabolism
Module
pand_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DRB87_13290 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DRB87_13290 (sucA)
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DRB87_13290 (sucA)
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QBC32139
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Position
complement(2935760..2938621)
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AA seq
953 aa
AA seq
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MSLMEQFQTNSYLFGGNAPYVEELYESYLDNPASVPDNWRQYFDALQNVPAVDGSNANDV
AHAPIVESFAQRAKANAFVPHAGASDLAVARKQVHVQSLVAAYRFLGARWANLDPLKRQE
RPAIPELEPAFYDLTESDMDSVYSAENTYFGFEQASLRDLLKSLRDTYCGSIGAEYMYIS
DPVQKRWWQERLEKVRATPNFTAEKKKHILERLTAAEGLERYLHTKFVGQKRFSLEGGES
FIVAMDELVHHAGAKGVQEIVIGMAHRGRLNVLVNTLGKMPADLFAEFEGKHVDDLPAGD
VKYHKGFSSDVSTGGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGEADAASVLPVQV
HGDAAFAGQGVVMETLNLAQTRGYGTHGTVHIVINNQIGFTTSDPRDARSTTYCSDVVKM
IEAPVLHVNGDDPEAVVLAMQLALDFRQEFKKDAVVDIVCYRKLGHNEQDTPAVTQPLMY
KKIAQHPGTRALYVEKLVTQGVITAEEGNAFVAAYRKAMDDGHHTVDPVLSNYKSKYAVD
WVPFLNKKWTDAGDTAVPLNELKRLAERITTIPANFKVHPLVEKVINDRRKMGAGEQPLD
WGMGEHLAFASLVSSGFAVRLTGQDSGRGTFTHRHSVLHDQNRERWNDGTYVPLQHVADG
QASFTVIDSVLSEEAVLGFEYGYSTAEPNTMVLWEGQFGDFANGAQVVIDQFISSGEVKW
GRVSGLTMLLPHGYEGQGPEHSSARIERYLQLCADTNMQVVQPTTPAQIFHLLRRQMIRQ
LRKPLIVFTPKSLLRHKEAVSDLSELAKGGFQTVIGETDASIDAKKVKRVVACSGRLYYD
LIARRREDKSTDVAIVRVEQLYPFPHKAFENELKKYENLTEVVWAQDEPQNQGPWFYIEH
HLIESMSAGQKLAYAGRAASASPAAGYYAKHYEQLKQLLDTAFGRLKGATVVQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatggaacaattccaaacgaactcgtacctcttcggcggcaatgccccctac
gttgaagaactgtacgaatcgtatctagacaatccggcttccgtgccggacaactggcgc
cagtatttcgacgcgctgcaaaacgttcccgctgttgatggttccaacgccaacgacgtg
gctcacgccccgatcgtggagtcgttcgcccagcgcgccaaggccaatgccttcgtgccg
cacgccggcgcctccgacctggccgtggcccgcaagcaggtgcacgtgcagtcgctcgtc
gccgcctaccgcttcctgggtgcccgctgggccaacctggacccgctcaagcgtcaggaa
cgtccggccattccggaactggaacccgcgttctacgacctgaccgaatcggacatggac
agcgtgtactcggccgagaacacgtacttcggtttcgaacaggccagcctgcgcgacctg
ctcaagtcgctgcgcgacacgtactgcggttcgatcggcgccgagtacatgtacatcagc
gacccggtgcaaaagcgctggtggcaagagcgtctggagaaggtgcgtgccacgcccaac
ttcaccgctgaaaagaagaagcacatcctcgaacgcctgaccgccgctgaaggcctcgag
cgttacctgcataccaagttcgtcggccagaagcgcttctcgctcgaaggcggcgaatcg
ttcatcgtggcgatggacgaactcgtccaccacgccggtgccaagggcgtgcaggaaatc
gtgattggcatggcccaccgcggccgtctgaacgtgctggtcaacaccttgggcaaaatg
ccggcggacctgttcgccgaattcgaaggcaagcacgtcgacgatctgccggccggtgac
gtgaagtaccacaagggcttctcgagcgacgtttcgacgggcggtggcccggtccacttg
tcgctggcgttcaacccgtcgcacctggaaatcgtgaacccggtggtcgaaggctcggcc
aaggcgcgtatggaccgtcgtggcgaagccgacgcggccagcgtgctgccggtgcaagtt
cacggtgacgccgcattcgcggggcagggcgtcgtgatggaaacgctgaacctcgcgcag
acgcgcggttacggcacgcacggcacggtgcacatcgtcatcaacaaccagatcggtttc
accacgtcggatccgcgtgacgcccgttcgacgacgtactgctcggacgtggtcaagatg
atcgaagcgccggtgctgcacgtgaatggcgacgatccggaagcggtcgtgctggccatg
caactggccctggacttccgccaggagttcaagaaagacgccgtcgtggacatcgtttgc
taccgcaagctgggccacaacgagcaggacacgccggcggtcacgcagccgctgatgtac
aagaagattgcccaacacccgggcacgcgcgcgctgtacgtcgaaaagctcgtcacgcaa
ggcgtgattacggccgaagaaggcaatgccttcgtcgcggcttaccgcaaggccatggac
gacggccaccacaccgtcgatccggtgctctcgaactacaagagcaagtacgcggtcgac
tgggtgccgttcctgaacaagaagtggaccgatgccggcgatacggccgtgccgctgaac
gaactcaagcgtctggccgagcgcatcaccacgatcccggcgaacttcaaggttcacccg
ctcgtcgagaaggtcatcaacgaccgtcgcaagatgggcgcgggcgagcagccgctcgac
tggggcatgggcgagcatctggccttcgcctcgctggtctcgtcgggcttcgctgtgcgc
ctgaccggtcaggattcgggccgcggcacgttcacgcaccgccactcggtgctgcatgac
cagaaccgcgagcgttggaacgacggcacctacgtgccgctgcaacacgtggccgacggt
caggccagcttcacggtgatcgactcggtgctctccgaagaagccgtgctgggctttgag
tacggttactcgacggccgagccgaacacgatggtgctgtgggaaggccagttcggcgac
ttcgccaacggtgcgcaggtcgtgatcgaccagttcatctcgagcggcgaagtgaagtgg
ggccgcgtgtcgggcctgacgatgctgctgccgcatggctacgaaggccagggtccggag
cactcgtcggcgcgtatcgagcgctacctgcaactgtgcgccgacacgaacatgcaagtg
gtccagccgaccacgccggcacagatcttccacctgctgcgtcgtcagatgatccgccag
ctgcgcaagccgctgatcgtgttcacgccgaagtcgctgctgcgccacaaggaagccgtg
agcgacctgtcggaactcgccaagggcggattccagacggtgatcggcgaaaccgatgcc
tcgatcgacgccaagaaggtcaagcgcgtcgtggcctgctcgggccgcctgtactacgac
ctgatcgctcgccgtcgtgaagacaagtcgaccgacgtcgcgatcgtgcgtgtggaacag
ctctatccgttcccgcacaaggcgttcgagaacgaactgaagaaatacgaaaaccttacc
gaagtggtgtgggcccaggacgagccgcaaaatcaaggtccgtggttctacatcgaacac
cacctgatcgaaagcatgagcgccggtcagaagctggcttacgcgggtcgcgcggcttcg
gcctcgcctgccgcgggctactacgccaagcactacgaacagctcaaacagctgctcgac
acggctttcggtcgcctcaagggcgcgaccgtggtgcagtaa
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