Pantoea sp. PSNIH2: PSNIH2_09170
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Entry
PSNIH2_09170 CDS
T03514
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp00540
Lipopolysaccharide biosynthesis
panp01100
Metabolic pathways
panp01250
Biosynthesis of nucleotide sugars
Module
panp_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PSNIH2_09170
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
panp01005
]
PSNIH2_09170
Enzymes [BR:
panp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PSNIH2_09170
Lipopolysaccharide biosynthesis proteins [BR:
panp01005
]
Lipid A
PSNIH2_09170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIX73944
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All DBs
Position
complement(2001462..2002316)
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AA seq
284 aa
AA seq
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MKEKVVSIGDIQVANDLPFVLFGGMNVLESRDLAMRICEHYVNVTNKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHAPEQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVEKFAEGGNDKVILCDRGANFGYDNLVVD
MLGFNVMKKVSNNSPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLVQMKAIDDLVKSFPALDTSS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaagttgtcagcatcggtgatattcaggtcgccaacgatctgccgtttgta
ctctttggtggaatgaacgtactggaatcgcgcgatctggctatgcgcatctgcgagcac
tacgttaacgtgaccaataaactgggtatcccgtacgtattcaaagcctctttcgataaa
gcgaaccgttcctctattcactcctaccgcggcccaggcctggaagagggcatgaagatt
ttccaggagctgaagcagactttcggcgtgaaaatcattactgacgttcacgcgccggag
caggcgcagccggtggcggacgtcgtggacgtcatccagctgcccgccttcctggcgcgt
cagaccgacctggtagaagcgatggcgaaaaccggcgcggtgattaatgtgaagaaacca
cagttcgtcagccctgggcagatgggcaatatcgttgagaaattcgccgaaggcggcaac
gataaggtgattctgtgcgatcgcggcgcgaacttcggctacgacaacctggttgtggat
atgctgggctttaacgtgatgaagaaagtctccaacaacagcccggtgatttttgacgtg
acgcatgcgctgcaaacgcgcgatccgttcggcgccgcgtccggcggtcgtcgcgcccag
gtggcggaactggcgcgcgcggggatggcggtgggcatcgccggtctgtttatcgaagcg
cacccggatccggccaatgcgaaatgcgacggcccgtccgcgctgccgctcgacaaactg
gagcctttcctggtgcagatgaaagcgatcgacgatctggtgaaaagtttcccggcgctc
gataccagcagctaa
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