Pantoea sp. SO10: FCN45_05595
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Entry
FCN45_05595 CDS
T06053
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03030
DNA replication
pans03430
Mismatch repair
pans03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCN45_05595 (holA)
03430 Mismatch repair
FCN45_05595 (holA)
03440 Homologous recombination
FCN45_05595 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pans03032
]
FCN45_05595 (holA)
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_05595 (holA)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCN45_05595 (holA)
DNA replication proteins [BR:
pans03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FCN45_05595 (holA)
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FCN45_05595 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QCP58880
LinkDB
All DBs
Position
complement(1220295..1221326)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLSAQLREVLRACYFLTGNEPLLIQESADAIRATASAQGFEEHFSVTIDAQTD
WDAIFVSCQSLSLFTQRQTLTLQLPENGPNAAIAEQLVKLSTLLHSDILLVLRLAKLTKA
QENSAWFKALSTQAVMVPCQTPEQTQLPRWVASRAKTMKLSVDDAAIQLLCYCYEGNLLA
LSQALERLSLLWPDGKLTLPRVEAAVNDAAHFTPFHWVDALLAGKSKRALHILHQLEKED
SEAVILLRTLQRDLLTLLHLQRNQAKQALRTLMDQQRIWQNRRALFTEALQRLDAQRLQR
AVHLLAELELSMKQDYGQNLWPQLETLSLLLCHRDFPLSFTDV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatttatcctgaacaactgagcgcgcagcttcgagaggtgctgcgcgcctgt
tattttctcaccggtaatgaacctctgctgattcaggaaagcgcggatgcaatccgtgct
accgccagcgcacagggatttgaagagcacttcagcgttaccattgatgcgcaaaccgat
tgggatgcgatcttcgttagctgtcaatcgctcagcctgtttacccaacgccaaaccctg
acgctgcaactgcccgaaaacggccccaatgccgctatcgccgagcagttagtgaaactc
tccacgctgctgcacagcgatattttgctggtgctgcgcctggcgaaactgaccaaagcg
caggagaacagcgcctggttcaaagcgctgagtacgcaggcggtaatggttccgtgccag
acgcctgaacagacacagctgccgcgctgggtggcgagtcgcgccaaaacgatgaaactc
agcgtagatgatgcggcgatccagctgctttgctactgctacgaagggaatctgctggcg
ctgtcgcaggcgctggaacgcttatcgctgctgtggccggatggcaaattaacgctgccg
cgcgtggaagccgccgtcaacgatgctgcgcactttaccccgttccattgggtggatgca
ttgctggcagggaaaagtaaacgcgccctgcacatcctgcatcagctggaaaaagaggac
agcgaagcggtgattctactgcgcacgctgcaacgcgatttactcacgctgctgcacctg
cagcggaatcaggcgaaacaagcgctgcgcacgctgatggatcagcaacgtatctggcaa
aaccgtcgcgcgctgtttactgaagccttgcagcgccttgatgctcagcgtttacagcgc
gcggtgcatttgctggcagagctggaactcagcatgaagcaggattacggacaaaacctg
tggccgcagctggaaacgctgtcgctgctgctgtgtcaccgcgatttcccactgagcttt
accgatgtctaa
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