KEGG   Pantoea sp. SO10: FCN45_10390
Entry
FCN45_10390       CDS       T06053                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pans  Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:pans00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pans03032]
    FCN45_10390 (topA)
   03400 DNA repair and recombination proteins [BR:pans03400]
    FCN45_10390 (topA)
Enzymes [BR:pans01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FCN45_10390 (topA)
DNA replication proteins [BR:pans03032]
 Prokaryotic type
  DNA Topoisomerases
   FCN45_10390 (topA)
DNA repair and recombination proteins [BR:pans03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FCN45_10390 (topA)
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom DUF2399
Other DBs
NCBI-ProteinID: QCP59762
LinkDB
Position
complement(2233037..2235634)
AA seq 865 aa
MGKSLVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTARKSADGEKAKPGKKVK
KDEKAALVNRMGVDPWHGWEADYQILPGKEKVVAELKNLAADADHIYLATDLDREGEAIA
WHLREVIGGDDKRFSRVVFNEITKNAIRQAFDKPGELNIERVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREHEIKAFVPEEYWEIHADFATPKGADLAMQVTH
QNDKAFRPVNREQTHAAVAILQKARYEVLDREDKPTSSKPSAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSLDAVAMARGYVESSFGKKYLPEAPNTYASKEN
SQEAHEAIRPSDVNIVAEQLKDMEADAQKLYQLIWRQFVACQMVPAQYDSTTLTVGAAEF
KLKAKGRTLRFDGWTRVMPALRKNDEDLTLPPVDVGDMLDLKELMPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLESNFRELMNY
DFTARMENSLDQVANNEAEWKAVLDSFFSDFSQQLDDAEKDPEEGGMQPNQMVLTSIDCP
TCSRPMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNVLEGDDAETNALRARR
RCQKCGTAMDSYLIDNQRKLHVCGNNPECDGYEIEQGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGDVAPPKEDPVPLPELQCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELQRFADRLPEKLKYLSEAPAADPEGNKTMVRFSRKTKQQYV
SSEKDGKATGWSMFYIDGKWQEAKK
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgggtaaatcactcgtaatcgttgagtccccggcaaaggccaaaacaatcaataaatac
ctcggtaatgactacgtggtgaaatccagtgtcggtcatatccgtgatttgccgaccagc
ggttcaactgcccgtaaaagtgccgacggggaaaaagcgaaacctggaaaaaaggttaaa
aaggatgagaaagccgcactcgtaaaccgcatgggtgtggatccctggcatggttgggaa
gcggattatcaaattctgccgggcaaagaaaaagttgtcgctgagctgaaaaacctggct
gccgatgcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggtggggacgataagcgctttagccgcgtagtatttaac
gaaattaccaagaatgcgattcgtcaggcgtttgacaagcctggcgagcttaatattgaa
cgtgtcaacgcacagcaagcgcgccgctttatggatcgcgtggtgggttacatggtgtcg
ccactgctgtggaagaaaattgcccgcggcctgtcagccggtcgcgttcagtcggttgcg
gtacgtctggttgttgagcgggagcacgaaatcaaagccttcgtgccagaagagtactgg
gaaatccatgctgatttcgccacgccgaaaggcgccgatctggccatgcaggtgacgcat
cagaatgacaaagcgttccgtccggtcaatcgtgagcaaactcacgcggcggtagcgatt
ttgcagaaagcgcgttacgaagtgctggatcgtgaagacaagccgaccagcagcaagcct
tctgcaccttttattacctcaacgctgcaacaggcggcgagtacgcgtttgggcttcggc
gtgaagaagaccatgatgatggcgcagcgtttgtatgaagcgggccacatcacctatatg
cgtaccgactccaccaacctgagcctggatgccgtggcgatggcgcgcggttatgttgag
agcagcttcggtaaaaagtatctgccagaagcgccgaatacctatgccagcaaagagaac
tcacaggaagcgcacgaagcgattcgtccttctgacgtgaatatcgtggctgagcagttg
aaagatatggaagctgatgcgcagaaactttatcagctgatttggcgccagtttgttgcc
tgccagatggttccggctcagtacgactccaccacgctgaccgtgggcgcggctgaattc
aaattgaaagccaaaggccgcacgctgcgtttcgatggctggacgcgcgtgatgcctgcg
ctgcgtaaaaatgatgaagatctgacgctcccgccggtagatgttggcgacatgctggat
cttaaagagctgatgccaagccagcacttcaccaaaccgccggcgcgcttcagtgaagca
tccctggtgcgtgagctggaaaaacgtggcattggtcgtccatcaacgtatgcctcgatt
atctccaccattcaggatcgtggttacgtgcgtgttgagaaccgccgtttctacgctgaa
aaaatgggtgaaattgttaccgaccgtctggagtctaatttccgcgagctgatgaactat
gacttcaccgcgcgcatggaaaatagcctcgatcaggtggcgaataatgaagccgaatgg
aaagcggtactcgactccttcttcagtgatttcagccaacagttagatgatgctgagaaa
gatccggaagagggcggcatgcagccgaaccagatggtgttgacgtcaattgattgtcca
acctgtagccgcccgatggggattcgcactgccagtaccggcgtgttcctgggttgctcg
ggttatgctttgccgccgaaagagcgttgcaagcagaccatcaacttgatcccggaaaat
gaagtgctcaacgtgctggaaggcgatgatgctgaaaccaatgcgctgcgtgctcgtcgt
cgttgccagaagtgtggcaccgcgatggacagctatctgatcgataaccagcgcaagtta
cacgtctgcggtaataacccagagtgcgacggctacgagattgagcagggcgaattccgc
atcaagggctacgacggtccgattgttgagtgcgagaagtgtggttctgaaatgcatctg
aaaatgggtcgtttcggtaagtacatggcgtgtaccaacgacgagtgcaaaaacacccgt
aagattctgcgtaacggtgatgtcgcgccgccaaaagaagatccggtgccgctgccagaa
ttgcagtgtgaaaagtcggatgcttactttgtgttgcgtgatggtgcagcgggcgtgttc
cttgccgctaataccttcccgaaatcacgtgaaacgcgcgcgccgctggtggaagagctg
caacgctttgccgaccgcctgccagaaaagctgaaatatctgtcagaagcgccagccgcc
gatccggaagggaataagacgatggtacgtttcagtcgcaagaccaaacagcaatacgtc
tcttccgaaaaagatggtaaagccactggctggtcaatgttctatattgatggcaaatgg
caggaagcgaaaaagtaa

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