Pantoea sp. PSNIH1: PSNIH1_05890
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Entry
PSNIH1_05890 CDS
T03464
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pant03016
]
PSNIH1_05890 (trmE)
Transfer RNA biogenesis [BR:
pant03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PSNIH1_05890 (trmE)
Prokaryotic type
Methyltransferases
PSNIH1_05890 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AIX49803
LinkDB
All DBs
Position
complement(1202238..1203602)
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AA seq
454 aa
AA seq
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MSHSDTIVAQATPPGRGGVGILRISGTRAADVAQALLGKLPKPRYADYLPFTDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRIVALPGLRIAQPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGVFSQRVNALVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNAVIGDLNGVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDATEAAAIWPDFVARLPAALPITVVRNKADMTGEILGLNEMNGHALIRLSAR
TGDGVETLRDHLKQSMGFAGNIEGGFLARRRHLQALESAATHLQQGKAQLLGAWAGELLA
EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccacagcgatactatcgttgcgcaggcaaccccaccgggccgcggcggcgtcggt
atactgcgtatctcaggcacccgggcagcagacgttgcgcaggcgctgctgggtaaactg
ccaaagccgcgctatgccgattatctgccctttaccgatgcagatggcagcgtgctggat
cagggcattgcgctgtggtttccgggtccgaactcctttaccggcgaagatgtgctggag
ctgcaggggcatggcggaccggttattctggacctgctgctgaaacgtattgtcgccctg
cccggcctgcgtattgcgcagccaggtgagttttcggagcgcgcgtttctgaatgacaag
ctcgatctggcgcaggctgaggcgattgccgatctgattgatgccagctcggaacaggcg
gcgcgctcggcagtgaactcgctgcagggcgtgttttcacagcgcgtaaatgcgctggtg
gaggcgctgacccacctgcgcatctatgttgaggccgctatcgattttccggatgaggag
atcgactttctttccgacggtaagattgaagcgcagcttaatgcggtgatcggcgacctg
aatggcgtacgcgccgaagcgcgtcagggcagcctgctgcgtgagggcatgaaggtggtg
attgccggacgcccgaatgcaggcaagtcgagcctgctgaatgcgctggcgggacgcgaa
gcggctatcgttaccgacattgccggcaccacgcgcgatgtcctgcgcgaacatatccat
attgatggaatgccgctgcatatcattgataccgccggactgcgcgaagccagtgatgaa
gtcgagcgcatcggcatcgagcgcgcctggcaggagattgaacaggccgatcgggtgctg
tttatggtcgatggcaccacaacggacgccaccgaagcggcggctatctggcccgacttt
gtggcacgcttaccggcggcgctgcccattaccgtggtgcgtaacaaagcggatatgacc
ggtgagatcctggggctgaatgagatgaacggccatgcgctaatccgcctttcagcccgg
accggcgacggtgtggaaacgctgcgcgatcatctgaaacagagcatgggctttgccggc
aatatagaaggcggattccttgcgcgccgtcgccatctgcaggcgctggagagtgccgcc
acgcatctgcagcaggggaaagcgcagctgctgggcgcgtgggcgggtgagctgctcgcg
gaagagctgcggctggcacagcaggcgctcagcgaaattaccggcgagtttacctctgac
gatctgctgggccgtatcttctccagcttctgtatcgggaaataa
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