Pantoea sp. PSNIH1: PSNIH1_13740
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Entry
PSNIH1_13740 CDS
T03464
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
pant
Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PSNIH1_13740
Enzymes [BR:
pant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PSNIH1_13740
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
HA2_N
AAA_22
AAA_23
T2SSE
PhoH
nSTAND3
NACHT
ResIII
AAA_30
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIX51210
LinkDB
All DBs
Position
complement(2887019..2890915)
Genome browser
AA seq
1298 aa
AA seq
DB search
MSSSIESPLAPLWARLDALTLRDRQRLQRRLQGAAKVKNSAAQQTIAAELADEFSVAEQR
VARRVAGTPRITFPENLPVSQKQQAISDAIRDHQVVIVAGETGSGKTTQLPKICLALGRG
VKGLIGHTQPRRLAARTVANRIAEELATVPGSTIGYKVRFTDQVSDSTQVKLMTDGILLA
EIRQDRLLLQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIDPQRFSRH
FNNAPVIEVSGRTYPVEVRYRPIAEEADESDRDQLQAIFDAVDELGQESRGDILIFMSGE
REIRDTADALMKRDLPHTEILPLYARLSNAEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEADFLSR
PAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITLNEN
EHYRLTPSGRTLAQLPVDPRLARMVLEAQRFGCVREVMIIAAALSIQDPRERPVEKQQAS
DEKHRRFADKESDFLTFVNLWNYIQEQQKALSGNQFRRQCKSDYLNYLRVREWQDIYTQL
RQVVREQGMPVNSEPAPYREVHCALLTGLLSHIGQKDAEKQEFTGARNARFAIFPGSGLF
KKPPKWTVVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSEPHWEKAQGAVMATEK
VTLYGLPIVQARKVNYSRIDPQLSRELFIRHALVEGDWQTRHAFFRTNLKLRSEVEDLEH
KSRRRDILVDDETLFAFYDRRLGKEVVSARHFDSWWKQASKENPDLLNFDKQMLIKEGAD
KVSQLDYPNVWQQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDEAGFEWQIPGVRRE
LIIALIKSLPKPLRRNFVPAPNYAEAFLGRVQPLAQPLLDALEREFRRMSGVTIERDAWH
WDQVPDHLKMTFRIVDEHNRKLQEGKDLHQLKQALKGKVQETLSKVADDGLEQSGLHIWS
FGDLPQSYEQKRGSYQVKAWPALVDEKDSVAIRLFDSEEEQQKMMWRGQRRLLLLNIPSP
VKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLMAEAGGPAWQQQNFEQLRDKV
RAELNDTVVTIAQQVEQILTCVFNINKFLKGRVDMTLALALADIKQQMSGLVYRGFVTGN
GYDRLGDTLRYLQGIERRLEKLPADPHSDRARMLKVQAVEQAWNVWRSKLPPQRRDDADV
VAIRWMIEELRISYFAQQLGTPYPVSDKRVLQAMEQLS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatccattgaatcacctttagcaccactctgggcccggcttgatgcgctgacg
ctgcgcgatcgccagcgcctgcagcgacgtctgcagggtgcggcaaaggtgaaaaacagc
gccgcacaacagaccattgccgcagagctggcggacgaattcagcgtggccgaacagcgt
gtcgcccggcgcgtggccggcaccccgcgcatcacctttcctgagaatctgccggtcagc
cagaagcagcaggcgatttcagacgcgattcgcgatcatcaggtagtaattgttgccggt
gaaaccggatcgggtaaaaccacccagctgccgaaaatctgcctcgcgctgggacgcggc
gttaaaggcctgatcgggcacacgcagccgcgtcgtctggcagcccgcaccgtagcgaac
cgtatcgcggaagagctggcgaccgtgccgggaagtaccatcggctataaagtccgtttt
accgatcaggtcagcgacagcacgcaggtcaaactgatgaccgacggtatcctgctggcg
gagatccggcaggaccggctgctgctgcagtacgacaccatcattattgatgaggcgcat
gagcgcagccttaacatcgattttctgctgggatacctgcgtgagctgctgccgcgccgc
cccgatctcaaagtgatcatcacctccgccaccatcgatccgcagcgcttctcgcgtcac
tttaataatgcgccggttattgaagtgtcaggtcgtacctacccggtagaggtgcgctac
cggcctatcgcggaagaagcggatgagagcgatcgcgatcagctgcaggccatttttgac
gccgtggatgagctggggcaggagagccgtggcgatatattgatcttcatgagcggagag
cgtgagatccgcgacacggctgatgcgctgatgaagcgcgatttaccgcataccgagatc
ctgccgctctatgcgcgtctctccaatgccgagcagaatcgcgtgtttcagtcccacagc
gggcggcgcattgtcctggccacgaacgtggcagagacctcgctcaccgtgccgggcatt
aaatatgtcatcgatcccggtaccgcgcgaatcagccgctacagctatcgcaccaaggtg
cagcgcctgccgattgagccggtttcacaggcttcggcaaaccagcgtaaagggcgctgc
ggccgcgtttcggaagggatctgtatccggctctactccgaggctgatttcctcagccgg
cccgcttttaccgatccggagatcctgcggaccaatctcgcgtcggtgatcctgcagatg
accgccctggggctgggcgatattgcggcgttcccgtttgtggaagcgcctgacaaacga
aatattcaggatggcgtgcggctgctggaagagctgggcgccattactcttaatgaaaat
gagcactaccggctgacgccgtccggtcgtaccctggcgcagctgccggtggatccgcgg
ctggcgcggatggtgctggaggcgcagcgctttggctgcgtgcgcgaggtgatgattatc
gcggcggcactctcgattcaggacccgcgcgagcggccggtcgagaaacagcaggcgtcc
gatgagaaacatcgccgctttgctgataaagagtctgactttctcacctttgttaatctc
tggaactatatccaggagcagcagaaagcgctgtcgggcaaccagttccgccgccagtgt
aaaagtgactatctcaactatctgcgcgtgcgcgaatggcaggatatctacacgcagctg
cgtcaggtcgtgcgtgaacaggggatgcccgtcaacagcgagccggcaccttatcgtgag
gtgcactgtgcgctgctgaccggcctgctgtcgcatatcggacagaaagatgcggagaag
caggagtttaccggtgcgcgcaacgcccgctttgccatattccctggctccggtttgttt
aaaaaaccgccgaaatggaccgtggtggcagaactggtagaaaccagccgcctgtggggc
cgggtggcggcacgcatcgatccggagtggattgagccgctggctcagcaccttatcaag
cgcagctacagcgaaccgcactgggagaaagcacagggcgcggtgatggctacggaaaag
gtaacgctctacgggctgcccatcgtgcaggcgcgtaaagtgaattacagccgcatcgat
ccgcagctgagccgcgagctgtttattcgccatgcgctggttgagggcgactggcagacg
cgccacgcctttttccgcaccaacctgaagctgcgcagtgaagttgaggatctggagcat
aaatcacgccgccgcgacattctggtggatgacgaaacgctgtttgctttttacgatcgc
cgtctgggcaaagaggtggtctctgcccgtcactttgacagctggtggaagcaggccagt
aaagagaatccggacctgctcaacttcgacaagcagatgctgatcaaagagggagcagat
aaggtcagccagctcgactaccctaatgtctggcagcagggcaacctgaagctgcggctc
acctatcagtttgagccaggcgccgatgcggatggcgtgaccgttcatatcccgctgccg
ctgctgaaccaggtggatgaagcgggttttgagtggcagatccccggcgtgcggcgtgag
cttatcatcgcgctgattaaatcgctgcccaaaccgctgcgccgcaattttgtgccggcc
cccaattacgcggaagcgtttctcggtcgcgttcagccgctggcacagccgctgctggat
gcgctggagcgtgagttccggcgcatgtcaggcgtgacgattgagcgcgatgcctggcac
tgggatcaggtgcccgatcaccttaaaatgacgttccgcattgtggatgagcacaaccgc
aagctgcaggaaggtaaagatctgcatcagctgaaacaggcgctgaaaggcaaagtgcag
gagacgctgtcgaaggttgccgatgatggtctggagcagagcggcctgcacatctggagt
tttggcgacctgccacagagttatgagcagaagcgcggcagctatcaggtcaaagcctgg
ccggcgctggtagatgaaaaagatagcgtggcgatccgcctgtttgacagtgaagaggag
cagcagaagatgatgtggcgcggtcagcgtcgcctgctgctgctgaacattccgtcaccg
gttaaatatctgcatgaaaagctgccgaataaagccaagctcgggctctactttaatccg
tatggcaaagtgctggagctgatagacgactgtattgcctgcggcgtggataagctaatg
gcggaggcgggcggccccgcgtggcagcagcagaattttgagcagctgcgcgataaagtg
cgggcggagctgaacgacaccgtggtgacgattgcgcagcaggttgagcagatcctcacc
tgcgtgttcaatatcaacaaatttctgaaaggccgcgtggatatgacgctggcgctggcg
ctggcagatatcaaacagcagatgagcggtctggtctatcgcggatttgtcaccggcaac
ggctacgatcggctgggagatacgctgcgctatctgcagggaatcgagcgccgtctggag
aagctgcccgccgatccgcacagcgatcgcgcccgcatgctgaaggtacaggcggtggaa
caggcgtggaacgtctggcgcagcaagctgccgccgcagcgccgggatgatgccgatgta
gtggcgatccgctggatgattgaagagctgcgcatcagctactttgctcagcagctgggt
actccctatccggtttcagataagcgggtgctgcaggcgatggagcagctgagctga
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