Pantoea sp. At-9b: Pat9b_1325
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Entry
Pat9b_1325 CDS
T01386
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_1325
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
ribosomal protein modification factors
Pat9b_1325
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
ADU68646
UniProt:
E6WC86
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Position
complement(1485785..1487548)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGESIANGEFVHYPNEKWFALPEDDSLPAG
ILDARLRKFYDPDDSLSAADLVDLQSGNAERGICGLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERHIKNRIIAESISLPEIPEAVMQRYPGVVEAIARLEAE
GFPIFAYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKDDADYPFVDWSFAGSTHEEFDTLM
AIFRAEDKEVYIADYEHLSVYACRIIVPGMSDIYPAEDLLLANNNMGAPLRETLLALPES
QWEPEAYLELITQLDEEGHDDFTRVRELLGLASGKDNGWFTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNQSIFSAERANYYRCLQTLLLLAMEEERDPVQYHRAFVRMYGEAAVDAA
SAAISGEAPFYGLQAVDLDLKAFPAHQSLLAAYEKLQAAKRRYWLAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttattcccggtaaagacgccgcactggaagactccatttcacgcttc
cagcaaaaattgcaggatttgggttttaacatcgaagaggcctcctggctgaacccggtt
ccgcacgtgtggtcagtgcatattcgcgatcgtgactgcccgctgtgctttaccaacggt
aaaggtgccagcaaaaaggctgcgctggcttctgcgctgggcgaatattttgagcgtctc
tcgactaactacttctttgctgacttctggctgggtgagtccatcgccaacggcgagttt
gtgcactaccccaacgagaaatggttcgccctgccggaagatgacagcctgccagccggg
atcctcgatgcccgtctgcgtaaattctatgatcctgacgatagcctgagtgcggcggat
ctggttgatctgcaatccggcaatgccgagcgtggcatctgtggcctgccctttacgcgt
cagtctgatcagcagacggtctatatcccgatgaatattatcggcaacctgtatgtgtcc
aacggcatgtcagcgggcaataccgctaacgaagcccgtgtgcaggggctgtctgaggtg
ttcgagcgccatattaagaaccgcatcattgccgagtccattagcttgccggaaattcca
gaagcggtgatgcagcgttaccctggcgtggtggaagccattgcccgccttgaagcggaa
ggtttcccgatttttgcctacgacgcctctctcggcggcaactacccggtcatctgcgtg
gtgttgttcaacccggcaaacggcacctgcttcgcatcatttggcgcacatcctgatttt
ggcgtggcgctggaacgtaccgttaccgaactgctgcaaggccgtggtctgaaagatctc
gacgtgttcacaccgccgactttcgatgatgaagaagttgcggaacatgccaacctggaa
acccactttatcgattcaagcggcctgatttcctgggatatgttcaaagacgatgctgac
tatccgtttgttgactggagctttgctggcagcacgcacgaagagttcgacaccctgatg
gccatcttccgcgcggaagataaagaagtgtatatcgctgattacgagcatctgagcgtc
tatgcctgccgtatcatcgtgccgggcatgtctgatatctacccggctgaagacttactg
ctggcgaataacaacatgggtgcgccgctgcgtgaaaccctgctggcgctgccggaaagc
caatgggaaccggaagcctatctggagctgatcacccaactggatgaagaaggacacgat
gactttacccgtgttcgcgaactgctgggtctggcctcgggcaaagacaatggctggttt
acgctgcgtattggtgagctgaaagccatgctggcgctggcgggtggtgacctcgatcag
gcactgatctggaccgaatggacgatggaatttaaccagtccatctttagcgctgagcgt
gctaattactaccgttgcctgcaaactctgctgttgctggcgatggaagaagaacgcgat
ccggtgcagtatcaccgtgcgtttgtgcgcatgtatggcgaagcggccgttgacgctgcc
tctgctgccatcagtggtgaagcaccgttctacggcctgcaagccgtggatttggattta
aaagccttcccggcccatcagtcgttgctggccgcttacgaaaagttgcaggcagccaag
cgtcgttattggttagcgaaataa
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