Pantoea sp. At-9b: Pat9b_3926 Help Entry Pat9b_3926        CDS       T01386                                  Name (GenBank) DNA ligase (NAD(+))   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pao  Pantoea sp. At-9b Pathway pao03030   DNA replication pao03410   Base excision repair pao03420   Nucleotide excision repair pao03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pao00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Pat9b_3926    03410 Base excision repair     Pat9b_3926    03420 Nucleotide excision repair     Pat9b_3926    03430 Mismatch repair     Pat9b_3926  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pao03032]     Pat9b_3926    03400 DNA repair and recombination proteins [BR:pao03400]     Pat9b_3926 Enzymes [BR:pao01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Pat9b_3926 DNA replication proteins [BR:pao03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Pat9b_3926 DNA repair and recombination proteins [BR:pao03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Pat9b_3926    NER (nucleotide excision repair)     GGR (global genome repair) factors      Pat9b_3926    MMR (mismatch excision repair)     DNA ligase      Pat9b_3926   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Pat9b_3926 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_5 HHH HHH_2 Xre-like-HTH RNA_ligase DNA_ligase_A_M HTH_23 Motif Other DBs NCBI-ProteinID:  ADU71216 UniProt:  E6WBU6 LinkDB All DBs Position complement(4281886..4283655) Genome browser AA seq 589 aa AA seqDB search MKGCIVLMLWLFSAGVMAEGICPNWSPIRAGQEIAQLTTQLRHWDDAYYRQGLNPVSDAD YDSLSQRLQQWQHCFTPDQSAYAAQPTTDGSTHHPVAHTGVRKLRDKRAVMEWMQGKADL WVQPKVDGVAITLVYRQGHLASMLSRGDGWRGEEWRAKASLIPAIPQQIATTQDEVVLQG ELFLQMTDHQQAQDGGKNARAQVAGAMMRRDDTPLLAQLGVFIWAWPDGPVALSERLAQL SRWGFGLTARWSERVNNEDEVASWRDRWFQGKLPFVTDGIVIHQSPVRRGRDWQPGQGEW SAAWKYQPAEVSSEVRSVAFNIGRTGKIAVVLNLIPVQLDDKTVRRVNIGSLRRWRELDV IAGDQVTLALAGQGIPRVERVIWRVAQRDYPDAPQSDDFNQLSCLTFSPPCRAQFLSRLS WLSEKSVLDISGIQRSTWQRLLDSGTISHLFSWLALTPEQIAQVAGISPARAQQIWHRFN QTRQQPLRRWVMALGLPIPRAALQAMPDSQWQQLQLRSVESWQQLPGIGGTLAQRIVTML HDHQVQQLITFLQQQAIPAGASVIGMRVVENRQAEAETQRQQASEKAEQ NT seq 1770 nt NT seq  +upstreamnt  +downstreamnt atgaaaggatgcatagtcttgatgttgtggctattcagtgctggcgtaatggcagagggc atttgtcccaactggtcgccgatacgtgccggacaggagatcgcccagttaaccacccag ctacggcactgggatgatgcttattatcgccagggcttgaacccggtaagcgatgccgat tacgacagcctctcccaacgtctacaacagtggcaacactgcttcactcccgatcaatcc gcttacgcggcacaaccgacaacggatggctctacgcatcatccggtggcgcacaccggg gtgcgcaaattacgtgataagcgggcggtcatggagtggatgcagggaaaagcagatttg tgggtacaacctaaagttgacggtgtagccattacgctggtgtatcgccaggggcatttg gcttccatgcttagccgtggcgatggttggcgtggtgaggagtggcgggcgaaagcctcc ctgattcccgccatcccacagcagattgccacgacacaggatgaggtggtgctgcaaggg gagttgtttttgcagatgaccgatcatcaacaggcacaggacggtggcaaaaatgcacgg gcgcaagtcgcgggggcgatgatgcgtcgtgatgacacaccactgttggcgcaactgggg gtatttatctgggcgtggccggacggcccggtagcgctgtcagagcgtctggcacaatta tcgcgttggggatttggcctcacggcacgctggagcgaacgggtcaataatgaggacgag gtagcaagctggcgcgatcgctggttccagggaaaattgccctttgtcactgacggcatt gttatccaccagtcacctgtgcgtagggggcgtgactggcaacccggacagggggagtgg tcagctgcgtggaaatatcagccagcagaggtcagcagcgaggttcgttcggtggcgttc aatatcgggcgcaccgggaaaattgcggtggtcctgaatctgatcccggtgcagttggat gataaaacggtgcgccgggtgaatattggctcgttacgacgttggcgtgagctggatgtg atagcgggcgatcaggtaacgctggcgcttgccggacagggtattccccgtgttgaacgg gtcatctggcgcgttgcacagcgtgactatcctgatgcgccgcaaagcgatgatttcaac cagctcagttgtctgacattcagtccaccctgccgggcgcaattcctgtcacgcctgagc tggctcagtgagaagtcagtgctggatataagcggcatacaacgcagtacctggcaacgc ctgctggatagcggcaccatcagccatctgttttcctggttggcgctgacgccagaacaa attgctcaggtggctgggatttcaccggcacgtgcgcagcagatctggcatcggtttaac cagacacgtcaacaaccgttgcgccgctgggtaatggcgttgggtctgccgataccgcga gccgctttgcaagccatgccggatagccagtggcaacagttgcagttgcgcagtgtggag agctggcagcagttaccgggtattggcggcacgctggcgcagcggattgtgacaatgctg cacgaccatcaggtgcagcaactcatcacctttttacagcaacaggctatccccgccggt gcatcagtgatcgggatgcgggtagttgaaaatcggcaggccgaggcggaaacgcagcgc cagcaggcgagcgaaaaagccgaacaataa

DBGET integrated database retrieval system