Pantoea sp. At-9b: Pat9b_3931
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Entry
Pat9b_3931 CDS
T01386
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pat9b_3931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_3931
Enzymes [BR:
pao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pat9b_3931
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pat9b_3931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
RecG_dom3_C
tRNA_anti-codon
SecA_DEAD
AAA_30
SNF2-rel_dom
IMS_HHH
SLFN-g3_helicase
DNA_pol_lambd_f
Helicase_RecD
ERCC3_RAD25_C
Cdd1
Motif
Other DBs
NCBI-ProteinID:
ADU71221
UniProt:
E6WBV1
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All DBs
Position
4287639..4289750
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AA seq
703 aa
AA seq
DB search
MVGNHASDGQKMKGRLLDAIPLSTLTGVGASQAAKLAKIGLYTIQDLLLHLPLRYEDRTQ
LYRINDLLPGIWATVEGEVLSSEITFGRRRMLVCQISDGSGVLTMRFFNFNAGMKNSLAT
GRRVTAYGEIKRGQRGAEIIHPEYRIQGEHSNVELQETLTPVYPTTEGIRQATLRNLTDQ
ALTLLETCAIAELLPPELSGGLISLPDALRTLHRPPPDLRLSELETGRHPAQRRLIMEEL
LAHNLSMLAVRAGAQRHHALPMPANHQLVDQLLAALPFSPTGAQQRVVAEIERDLAHDFP
MMRLVQGDVGSGKTLVAAMAALNVIAYGKQVALMAPTELLAEQHANNFRQWFAPLGIEVG
WLAGKQKGKARQAQQEAIASGQVAMVVGTHALFQEQVQFNGMALVIIDEQHRFGVHQRLA
LWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSTIDELPPGRTPVTTVAIPDSRRS
DIITRVQSACHEGRQAYWVCTLIEESELLEAQAAEATWQELKVALPDLQVGLVHGRMKPA
EKQAVMQAFKANEIQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAI
ASHCVLLYKAPLSKTAQKRLQVLRDSNDGFVIAQHDLEIRGPGELLGTRQTGNAEFKVAD
LLRDQAMIPEVQRVARHIHQHYPQQAVALIERWLPETERYSNA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaaccatgcaagcgacgggcaaaaaatgaaaggccgtctgctggatgccatc
ccgctcagtaccctgaccggcgtcggcgccagccaggcggcgaaactggctaagattggc
ctgtacaccatccaggatctgctgctgcacctgccgttacgctacgaagaccgcacccaa
ctctatcgcattaatgacctgctgccgggtatctgggccacggtggaaggtgaagtatta
agtagtgaaatcacctttggccgccgccgtatgctggtatgccaaatcagcgatggctcg
ggtgtgctgaccatgcgcttcttcaacttcaatgctgggatgaaaaacagcctggcgaca
ggccgccgcgtcaccgcatacggtgaaatcaaacgcggccagcgtggcgcggaaattatt
catccggaatatcgcatccagggcgagcacagcaacgttgagttgcaggaaaccctgacg
ccggtgtatcccaccaccgaaggcattcgccaggcaacgctgcgtaacctgaccgatcag
gcgctgacgttgctggaaacctgcgccattgctgagctgttgccgccggaactgagtggc
gggttgatcagcctgccagatgccttgcgcaccctgcatcgtcctcccccggatttacgc
ctgagtgaactggaaaccggacgccatccggcgcagcgccgtctgattatggaggagctg
ctggcacataacctcagcatgctggccgtgcgcgcgggcgcacagcgtcatcacgcgttg
ccgatgcctgccaatcatcagctggtcgatcaattgctggccgccctgccgttctccccc
accggtgcgcagcaacgggtggtcgcggaaattgagcgcgacctggcacatgatttcccg
atgatgcgtctggtacagggcgatgtgggatcgggcaaaacgctggtcgccgccatggcg
gcgctgaatgtgattgcttatggcaagcaggtggcgctgatggcacccaccgaattactc
gccgaacagcacgctaataacttccgccagtggtttgcgccactcggcattgaagtgggc
tggctggcgggtaaacagaaaggcaaggcgcgtcaggcgcagcaggaagccattgccagc
ggtcaggtggcaatggtggtcggcacccatgcgctgttccaggagcaggtacaatttaac
ggcatggcgctggtgattatcgatgaacagcaccgttttggcgtccaccagcgactggcg
ctgtgggaaaagggcgaagagcagggttttcatccgcatcagttgatcatgaccgccacg
ccgattccacgcaccctggcgatgaccgcctacgcggatctcgatacctcaaccattgac
gagctaccgccaggccgtaccccagtgaccaccgtcgccattcccgacagtcgccgcagc
gatatcatcacgcgcgtgcagagcgcctgtcatgaaggacgccaggcatattgggtctgt
acgctgatcgaagaatccgaactgctggaggcacaggcagccgaagccacctggcaggag
ctgaaggtggcactaccggatcttcaggttgggctggtgcatggccgcatgaaaccggct
gagaagcaggcggtgatgcaggcgttcaaggccaatgaaatccaactgctggtcgccacc
acggtgatcgaagtcggggtggatgtgccgaatgccagcctgatgattatcgaaaacccg
gaacgtctcggacttgcgcagctgcatcagttgcgtgggcgcgtggggcgcggcgcgatc
gcctcgcattgcgtgttgctgtacaaagcaccgctgagcaaaacggcgcaaaaacgctta
caggtgctacgtgacagcaacgatggctttgttatcgcccagcatgatttggaaattcgt
ggtcccggtgagttgcttggcacccgccagaccggcaacgcggagttcaaagtcgccgat
ttgctgcgcgaccaggccatgatcccggaagttcagcgcgtagcgcgccatatccaccag
cactatccgcagcaggcggtggcgttgattgagcgctggttaccggaaaccgaacgctac
agtaacgcgtag
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