Pseudomonas aeruginosa PA7: PSPA7_1244
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Entry
PSPA7_1244 CDS
T00569
Symbol
rhl
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
3.6.4.13
]
Organism
pap
Pseudomonas aeruginosa PA7
Pathway
pap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPA7_1244 (rhl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pap03019
]
PSPA7_1244 (rhl)
Messenger RNA biogenesis [BR:
pap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPA7_1244 (rhl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-ProteinID:
ABR81035
UniProt:
A6V0P4
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All DBs
Position
complement(1254177..1255766)
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AA seq
529 aa
AA seq
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MLYTGARSFLNHYEIAVLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAAPTGDKP
SEKRPRKPRAPRADNESGGPRHGDKADRAEKGEKPAKPAAKEGRDGKPRGDKPRRERTAK
PKPVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQD
AIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALT
KYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEA
DRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVA
SDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMS
GDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRT
GRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELLKPVPRKH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctttacactggcgcccgttcattccttaaccactacgagatcgccgtgctcaaagca
ctcaagaaaatcttcggcaaggccgacggaacccagccgcagagcggttcctccccggtc
ccgcaaggccctgccggcgctaccgcgaaaggtaccgccgcccccaccggcgacaagccg
tccgagaaacgcccacgcaagccgcgcgccccgcgcgccgacaacgagtccggcggcccg
cgccatggcgacaaggccgacagggccgagaaaggcgagaaacccgccaagccagccgcc
aaagaaggccgcgacggcaagcctcgcggcgacaagccgcgccgcgaacgcacggccaag
ccgaagccggtggacaactggaagctggaagacttcgtggtcgagccgcaggaaggcaag
acccgcttccacgacttcaacctcgcgccgagcctgatgcacgccatccatgacctcggt
ttcccctactgcacgccgatccaggcgcaggtactgggcttcaccctgcgcggccaggac
gccatcggccgcgcccagaccggtaccggcaagaccgccgcgttcctcatctcgatcatc
acccagttgctgcagaccccgccgccgaaagagcgctacatgggcgagccgcgcgcactg
atcatcgccccgacccgcgaactggtggtgcagatcgccaaggacgccgcggcgctgacc
aagtacaccgggctgaacgtgatgaccttcgtcggcggcatggacttcgacaagcagctc
aagcaactggaggcgcgcttctgcgacatcctggtcgctactcccggccgcctgctggac
ttcaaccagcgcggcgaggtgcacctggacatggtcgaggtgatggtcctcgacgaagcc
gaccgcatgctcgacatgggcttcatcccgcaggtccggcagatcatccggcagaccccg
cacaagggcgagcgccagaccctgctgttctcggcgaccttcaccgacgacgtgatgaac
ctcgccaagcagtggaccgtcgatccggcgatcgtcgagatcgaaccggagaatgtcgcc
agcgacaccgtcgagcagcacgtctatgcggtggccggcagcgacaagtacaagctgctg
tacaacctggtggcgcagaacaactgggaacgggtgatggtcttcgccaaccgcaaggac
gaagtccgccgcatcgaggaacgcctgaccaaggacggcatcagcgccgcccagatgtcc
ggcgacgtgccgcagcacaagcgcatccgcaccctggaaggcttccgcgaaggcaagatc
cgcgtactggtggccaccgacgtggccggccgcggcatccacatcgacggcatcagccac
gtgatcaacttcaccctgccggaagatccggacgactacgtgcaccgcatcggccgtacc
ggccgcgccggcgcctcgggcacctcgatcagcttcgccggcgaggacgacgccttcgcc
ctgccgccgatcgaagaactgctgggccgcaagatcacctgcgagatgccgccggccgag
ttgctcaagccggtaccgcgcaagcactga
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