Pandoraea apista: SG18_07530
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Entry
SG18_07530 CDS
T03588
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
papi
Pandoraea apista
Pathway
papi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG18_07530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
papi03021
]
SG18_07530
Transcription machinery [BR:
papi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG18_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_20
HTH_24
GerE
HTH_IclR
HTH_40
HTH_10
HTH_29
HTH_5
HTH_28
HTH_Tnp_ISL3
TnsD
HTH_38
HTH_7
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AJE98072
UniProt:
A0A5E5NYD6
LinkDB
All DBs
Position
complement(3612721..3613236)
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AA seq
171 aa
AA seq
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MPADDTLPHDTTLRGLYNDHHGWLKGWLHRKTGCSHRAADLAHDTFVRLLERETPRMLAS
PRAFLTTVAQRVLYNHWRREQIERAYLDALAQQPEALVPSPEERAIVLETLLEIDRCLDG
LPSLVKRAFLLAQLDGMTHLEIAAELGISLSTVKRHLVRAGTQCFFTMGAA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacacgctgccgcacgacaccacgctgcggggactttacaacgaccat
cacggctggctaaagggctggctgcatcgcaagaccggctgttcgcaccgcgcagccgat
ctcgcgcacgacacgtttgtgcgtctgctcgagcgcgaaacaccgcgcatgctggcctcg
ccgcgcgccttcctcacgaccgttgcccaacgcgttctctacaaccattggcggcgcgag
caaatcgaacgcgcttatctcgacgctctcgcgcaacagccggaggcgcttgtgccgtca
cccgaagagcgcgccatcgtactcgagacgctgctcgagatcgaccgttgcctcgacggt
ttgccgtccctcgtcaaacgcgccttcctgctggcgcaactcgacggaatgacccatctg
gagattgcggccgaactcggcatttcgctctccacggtgaagcggcatctcgtgcgcgcc
ggtacgcaatgcttcttcacgatgggcgccgcatga
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