Pandoraea apista: SG18_16115
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Entry
SG18_16115 CDS
T03588
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
papi
Pandoraea apista
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
papi03019
]
SG18_16115
03009 Ribosome biogenesis [BR:
papi03009
]
SG18_16115
Messenger RNA biogenesis [BR:
papi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SG18_16115
Ribosome biogenesis [BR:
papi03009
]
Eukaryotic type
Pre-60S particles
RNases
SG18_16115
BRITE hierarchy
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GFIT
Motif
Pfam:
RNase_T
CTD1
Motif
Other DBs
NCBI-ProteinID:
AJE99337
UniProt:
A0A0B5FH05
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All DBs
Position
213519..214157
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AA seq
212 aa
AA seq
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MSVIPSQNPASAAAETTLARAEFNLVWLDMEMTGLQPDSDRIIEVAVVVTDSALTRRIEG
PVFAIHQSDAVLDGMDDWNKSTHGRSGLIDRVKASVIDEASAEAQLIEFLSQYVPPNKSP
MCGNSICQDRRFMARYMPKLEAFFHYRNLDVSTLKELCRRWEPTVYKGFTKRAAHTALAD
IHESIDELVYYREHFLKTAVPGAPDAPASAPV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcatcccatcccaaaatcccgcgtctgccgctgccgagacgacgctcgcccgc
gccgagttcaatttggtctggctcgacatggaaatgaccggtttgcagcctgacagcgac
cggattatcgaggtggcggtcgttgtcacggattctgcgctgacgcgtcgtatcgagggg
ccggttttcgcaatccaccagtcagatgcagtgctggacggcatggacgactggaataaa
tcgacgcatggccgctcgggcctgatcgaccgggtgaaggcatcggtcattgatgaggcc
tcggcggaagcccaactgatcgagttcctgtcccaatacgtgccgccgaacaagtcgccg
atgtgcggcaactcgatttgccaggaccgccgcttcatggcgcgttacatgcccaagctc
gaagccttcttccattaccggaatctggacgtcagcacactcaaggaactgtgccgccgc
tgggaaccgacggtctacaaaggctttaccaagcgtgcagcgcacacggcgttggccgac
attcacgagtcgatcgacgaactggtgtattaccgcgaacatttcctgaaaacagccgtg
cctggcgcgccggacgccccggcatctgcgccggtctga
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