Pandoraea apista: SG18_16890
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Entry
SG18_16890 CDS
T03588
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
papi
Pandoraea apista
Pathway
papi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
papi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG18_16890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
papi03000
]
SG18_16890
03400 DNA repair and recombination proteins [BR:
papi03400
]
SG18_16890
Enzymes [BR:
papi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SG18_16890
Transcription factors [BR:
papi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SG18_16890
DNA repair and recombination proteins [BR:
papi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SG18_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AJE99458
UniProt:
A0A0B5FI93
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Position
complement(378165..379652)
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AA seq
495 aa
AA seq
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MTLDPEVCYKAVSARDRRFDGWFFVGVSSTGIYCRPVCNVRTPRFENCSFYGSAAAAEKA
GFRPCLKCRPELAPGGARFDATRELADAAAAMIDEGFLNRAGLPALAARIGITERHLRRI
FADEFGVSPIEYAQTQRLLLAKRLLTDTALPVTEIALASGFGSVRRFNGLFKTRYGFAPG
RLRLNARHAALPDSDLVFQLAYRPPFAWHALLDFLGDRAIEGVELLEGDIYTRTLNIERQ
DGQTVAGWCRVTPRPDRHVLQVTLPPVLAGSVPQVLGKLRHLFDLGARPDVIDAHLGPLA
TTTPGLRVPGGVDGFEIAVRAIVGQQITVKGARRLLGRLAQRFGTPLSAPAHGLTHTFPS
AAQLLAVPPESLGEAGIIRSRSAAIHGVAQAIVDGHLRLDPLAPLETTVKALLAIKGIGP
WTAQYIAMRALGSPDAIPVDDLVLRQALGVRDGRAVTARTAQWAPWRAYAALHIWRAAAQ
GPAGQPVETLQEVLA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgaccccgaagtctgctacaaggctgtctccgcccgcgaccggcgtttcgac
ggctggttcttcgtcggcgtgtcgtccaccggcatctactgccgcccggtatgtaacgtg
cgtacgcctcgcttcgaaaactgctcgttctacggcagcgccgccgcggccgagaaggcc
ggcttccgcccctgcctgaagtgccgccccgaactcgcccccggcggcgcgcgtttcgac
gccacccgcgaacttgccgacgccgccgcggccatgatcgacgaaggcttcctcaaccgg
gccggactgcccgcacttgccgcccgcatcggcatcaccgagcgtcatctgcgccgcatc
ttcgccgacgaattcggtgtctcgcctatcgagtacgcgcagacacaacggctgctgctc
gccaaacggctgctcaccgacacggccttaccggtcacggaaatcgccctcgcctccggc
ttcggcagcgttcggcgcttcaacggtctgttcaagacccgctacggcttcgcccccggc
cggctccgcctgaacgcccgccacgccgccctgcccgacagcgatctcgtattccagttg
gcctaccggccgccgtttgcatggcacgcgctgctcgacttccttggcgaccgggcgatc
gagggtgttgaactgcttgagggcgatatctacacccgtacgctgaacatcgagcggcaa
gacgggcaaaccgtcgcgggctggtgtcgcgtgactccgcggccggatcgccatgtgctg
caagtcaccctgcccccggtgctggccggcagtgtgccgcaggtcctgggcaagctgcgt
catcttttcgatctgggcgcccgtcccgacgtcatcgacgcgcatctcgggccgcttgcc
acgacgacaccgggcctgcgcgtgccgggaggggtcgacggcttcgaaattgccgtgcgc
gccatcgtcggccagcaaatcaccgtcaagggcgcacgacgcttgctcggtcggctcgcg
caacgcttcggcacgccgctaagcgcaccggcgcacggcttgacgcatacgtttcccagc
gccgcgcaactgctcgccgtgccacctgagtcattgggcgaagccggtatcattcggagc
cgaagtgccgcgattcacggggtcgcgcaggcgatcgtcgatggccacctgaggttggat
ccgctggcgccattggagaccactgtgaaggcactgctcgcaatcaagggcatcggccca
tggacagcgcagtacatcgccatgcgcgccctcggctcgcccgacgcgatccccgttgac
gatctggtgctgcgtcaggcgcttggcgtgcgcgacgggcgcgccgtgaccgcacgcacg
gcccaatgggcgccatggcgcgcgtatgcggcgctgcatatctggcgagcggcggcccag
gggccggcggggcagccggtcgagactttgcaggaggtgttggcatga
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