Pectobacterium aquaticum: DMB82_0015830
Help
Entry
DMB82_0015830 CDS
T07653
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
paqu
Pectobacterium aquaticum
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paqu03016
]
DMB82_0015830 (tcdA)
Transfer RNA biogenesis [BR:
paqu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DMB82_0015830 (tcdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
DAO
UDPG_MGDP_dh_N
3HCDH_N
ELFV_dehydrog
Sacchrp_dh_NADP
NAD_binding_7
Pyr_redox_2
AlaDh_PNT_C
TrkA_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
UEM38610
LinkDB
All DBs
Position
complement(3396469..3397287)
Genome browser
AA seq
272 aa
AA seq
DB search
MSTQLSEAYLQRFGGTARLYGQQALALFSQAHVCVIGIGGVGSWAAEALARTGIGAITLI
DMDDVCVSNTNRQIHALRQHTGQSKTEVMAERILAINPECHVTCVDDFISAENVAELLDQ
NFSYVIDAIDSVRPKAALLSYCRRYKIPVVTTGGAGGQIDPTRIEVVDLAKTIQDPLAAK
LRERLKNDFNVVKNSKGKLGIDCVFSSEPLVYPQPDGSVCASRSTADGVMRMDCASGFGA
ATMVTATFGFVAVSHALKKMIAKRERASELQK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcaattatccgaagcctatttgcaacgcttcggcggcaccgcgcggttatat
ggtcaacaggcgctggcgctgttttctcaggctcacgtttgcgtgattggcattggtggc
gtcggctcctgggcggctgaggcgctggctcgtaccggcatcggcgcgatcacactgatc
gatatggatgatgtgtgtgtcagtaacaccaatcggcagatccacgcgctgcgtcagcat
actgggcagtcgaagacggaagtgatggctgaacgtattctggcgatcaacccagaatgt
cacgtcacctgcgtggatgatttcatcagcgcggaaaacgtggccgagctgctcgaccag
aatttcagctatgtgattgatgccatcgacagcgtgcgcccgaaggcggcgctgctctcc
tactgtcgccgctataagatccctgtagtgacaactggcggtgcgggtggacagatcgat
ccgacccgcattgaggtggtcgatctggcgaaaaccattcaggatccgctggccgccaag
ctgcgtgaacggctcaagaacgattttaacgtggtgaagaacagcaaagggaaactgggg
atcgactgcgtattttccagcgaaccgctggtttatccgcagcctgacggctccgtctgt
gcgtctcgcagcacggccgatggggtgatgcggatggattgtgcgtcaggctttggcgcc
gcgacaatggttaccgcaacctttgggtttgttgcggtatctcatgcgctgaagaagatg
atagcgaaaagagaaagggcgtctgaattgcagaaataa
DBGET
integrated database retrieval system
