Paraburkholderia aromaticivorans: CJU94_21540
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Entry
CJU94_21540 CDS
T05169
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb00260
Glycine, serine and threonine metabolism
parb01100
Metabolic pathways
Module
parb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CJU94_21540
Enzymes [BR:
parb01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CJU94_21540
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CJU94_21540
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
FAD_binding_2
HI0933_like
NAD_binding_7
Pyr_redox
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ASW00820
UniProt:
A0A248VR30
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All DBs
Position
2:395146..398148
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRAMPLTFTFNGRQYQGYQGDTLASALLANGEHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEHTDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALNWAHKIEDELRQMSDVKILC
RSTAFGYQDHNLVTVTQRLTEHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRASESKG
TLPALARRYGVKVMNGVVITAAHGKLRVASVDLASYSNGQVGAKQGELSCDLLAMSGGWS
PVLHLFAQSGGKAHWHDGKACFVPGKAMQAETSVGACAGDFTLGQGIRFAVDAGVEAARA
AGFIVARPNPVQVAEITEAKMQPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPKAGEDLHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
QDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLSDDPAFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLEKIGETVTIPLSSGKQIAAKVTSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactccccaacggcgggcgcatcaatcgcgcgatgccgctgacg
ttcacgttcaacggccgccagtatcaaggctatcagggcgacacgctggcttcggcgctg
cttgcgaacggcgagcatttcgtcgcgcgcagctggaagtatcaccggccgcgcggcatc
gtcacggcgggtgtggaggagccgaatgccgtcgtgcaactcgaaaccggcgcatacacg
gtgccgaatgcgcgtgccaccgaggtcgagctgtatcaggggctcgtcgccaccagcgtg
aacgcgaagccgagcatcgagaaagaccgcatggcggtcaaccagaagatcgcgcgcttc
attccggcgggcttctactacaagaccttcatgtggccgcgcaaattctggccgaagtac
gaagaagtgatccgcgacgcggccggtctcggcaaggcgccggagcacaccgacgcggac
cgctacgacaagtgctttgcgcattgcgacgtgctggtggtgggcggcggcccgaccggc
ctcgcggctgcgcacgctgccgcattgtccggcgcgcgcgtgacgctggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagcccgcgctg
aactgggcgcacaagatcgaagacgaactgcggcagatgtccgacgtgaagatcctgtgc
cgcagcacggcgttcggctatcaggaccacaatctcgtgacggtgacgcagcggctcacc
gagcatctgccggtatcgcagcgcaagggcacgcgcgaactgatgtggaagatccgcgcg
aaacgcgtgattctcgcgaccggcgcgcatgaacggcccatcgtgttcggcaacaacgat
ctgccgggcgtgatgctggcctcggccgtatcgacgtatctgcatcgctatgcggtgctg
ccgggccgcaacgcggtggtgttcaccaataacgacgacggctaccaatgcgcgctcgat
ctgaaagcggccggcgctcaggtgacggtggtcgatccgcgcgcgagcgaatcgaagggc
acgctgcccgcgcttgcacggcgctatggcgtcaaggtgatgaacggcgtggtgatcacg
gcggcgcacggcaaactgcgcgtagcgtccgtggacttggcgtcgtattcgaacggacag
gtcggggcgaagcagggcgagctatcgtgcgacctgctcgccatgtccggcggctggagc
ccggtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgacggcaaggcc
tgcttcgtgccgggcaaggcgatgcaggcggagacgagcgtcggcgcctgcgcgggcgac
ttcacgctcggccagggcattcgctttgcggtcgatgcgggcgtcgaggcggcgcgcgcg
gcgggcttcatcgttgcgcggccgaatccggtgcaggtggccgagatcaccgaagcgaag
atgcagccgctgtggctggtcggcggccgtgaactggccacgcgcgggccgaagcagttc
gtcgacttccagaacgacgtgtcggccgcggatattttcctcgcggcgcgcgaaggcttc
gaatcggtcgagcacgtcaaacgctatacggcgatgggtttcggcaccgaccagggcaag
ctcggcaacatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattcccgag
accggcaccaccaccttccggccgaactacacgccggttaccttcggcacgtttgccggc
cgcgagctgggcgagtttctcgatccggtgcgcaagacggcggtgcacgaatggcacgtg
gaaaacggcgcggccttcgaggacgtgggcaactggaagcgtccgtggtactacccgaaa
gccggcgaagacctgcacgcggcggtggcgcgcgaatcgctggcggtgcgcacgagcgtg
ggcattctcgacgcctcgacactcggcaagatcgacattcagggccccgattcggcgaag
ctgctgaactgggtctatacgaatccgtggagcaagctggaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggcacgcgtgctgacgtggctc
gaacgctggctgcagacggaatggccggatatgcgcgtgcggctcgcgtcggtgacggat
cattgggcgactttcgccgtggtcggtccgaacagccgcaaggtgctgcagaaggtctgc
caggacatcgacttcgcgaacgcggcgttcccgttcatgagctatcgcgaaggcacggtg
gcgggcgcggcctcacgcgtgatgcgcatcagcttctcgggcgaactggcttatgaagtg
aacgtgccggcgaacgtcgggcgcgcggtgtgggaagcgctgatggccgcgggcgcggaa
ttcgacatcacgccgtacggcaccgaaacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggatacggacggttcgatgacgccgtacgacctcggcatgggcggg
ctcgtcgcgaagtccaaggactttctcggcaagcgttcgctgacccgttcggacacggcg
aaggcggggcgcaagcaactggtcggcttgctctcggacgacccggcgttcgtgataccg
gaagggtcgcagatcgtcgccggtccattccagggcgacacggcgccgatgctcggccac
gttacgtcgagctactacagcccgatcctgaagcgctcgatcgcgatggcggtcgtgaag
ggcggactcgagaagatcggcgagacggtcacgattccgctttcgagcggcaaacagatt
gcagcgaaggtcaccagttcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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