Paracoccus sp. Arc7-R13: EOJ32_03385
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Entry
EOJ32_03385 CDS
T06050
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOJ32_03385 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parr03019
]
EOJ32_03385 (pnp)
03016 Transfer RNA biogenesis [BR:
parr03016
]
EOJ32_03385 (pnp)
Enzymes [BR:
parr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EOJ32_03385 (pnp)
Messenger RNA biogenesis [BR:
parr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EOJ32_03385 (pnp)
Transfer RNA biogenesis [BR:
parr03016
]
Prokaryotic type
tRNA degradation factors
EOJ32_03385 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AZY92820
UniProt:
A0A3Q9TDI0
LinkDB
All DBs
Position
683717..685861
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AA seq
714 aa
AA seq
DB search
MFDEVKKSIQWGQETLTLETGKVARQADGSVIATLGETSVMANVTFAKAPKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPSEKETLTARLIDRPIRPLFAPGFKHEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIAGARVGFSNGEYVLNPEVQDMDGLRNNPEQR
LDLVIAGTADAVMMVESEAYELTEQEMLGAVKFGHDAIKPVIDLIIDLAEDAAKEPFDFQ
SPDYSALYNRVKSLGEADMRAAYAIRDKSERQDAIAAAKTKVKDALTEEELADANLGSAL
KKLESGILRGDIISGGARIDGRDTKTVRPIVSQVGILPRTHGSSLFTRGETQALVVTTLG
TGDDEQIIDALHGNSRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEEDGRFA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEQALAQAKDGRLHILSE
MANALTAGRTEFSAHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIK
IASANADSIKKAYDMIYSIVAEPEEGKVYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIAN
RRLGHPNEILKEGQEVRVKLLGFDDRGKVRLGMKMVDQETGAEIEEKQEQSAEG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgaagtgaagaaatcgatccagtggggccaggaaaccctgacgctggaaacg
ggcaaggttgcccgtcaggccgacggcagcgtcatcgccactttgggcgagaccagcgtc
atggccaacgtcaccttcgcaaaggcgccgaagcccggacaggacttctttccgctgacg
gtgcattaccaggaaaaatactatgccgccggcaaggtcccgggcggcttcttcaagcgc
gaggcgcgtccgtccgaaaaggagacgctgaccgcgcgcctgatcgaccgtccgatccgc
ccgctgttcgcccccggcttcaagcatgaagtgctggtgatgtgcaccgtgctgagccac
gacctggtcaacgatcccgacatcgtcgcgatgatcgcggccagcgccgcactgaccatc
tcgggcgtgcccttcatgggcccgatcgcaggcgcccgcgtcggcttctcgaacggcgaa
tacgtgctgaaccccgaggttcaggacatggacggcctgcgcaacaaccccgaacagcgc
ctggacctggtcatcgccggcaccgccgacgccgtgatgatggttgaatccgaggcctat
gagctgaccgagcaggagatgctgggcgcggtcaagttcggccatgacgcgatcaagccg
gtgatcgacctgatcatcgacctggccgaggatgccgccaaggagccgttcgacttccag
tcgcccgactacagcgcgctctacaaccgcgtgaagtcgctgggcgaggcggacatgcgc
gcggcttacgcgatccgcgacaagtccgagcgtcaggacgccatcgccgccgccaagacc
aaggtcaaggacgccctgaccgaggaagagctggccgatgccaacctgggttcggcgctg
aagaagctggaatcgggcatcctgcgcggcgacatcatcagcggcggcgcccgcatcgac
ggccgggacaccaagaccgttcgtccgatcgtcagccaggtcggcatcctgccgcgcacc
cacggatcgtcgctgttcacgcggggcgagacgcaggcgctggtcgtgacgaccctgggc
accggcgatgacgaacagatcatcgacgcgctgcacggaaactcgcgctcgaacttcctg
ctgcactacaacttcccgccctattcggtcggcgaggttggtcgcgtgggcagccccggc
cgtcgcgaaatcggccacggcaagctggcatggcgtgcgctgcaggcggttctgcccgcg
gcgacggacttcccctacaccatccgcgtcgtgtccgagatcacagaatcgaacggatcg
tcgtcgatggcgtcggtctgcggcggttcgctgtcgatgatggatgcgggcgtgccgctc
aaggcgccggtcgcgggcgtggcgatgggcctgatcctggaagaggacggccgctttgcc
gtgctgaccgacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtggcg
gggaccgagaacgggatcacgtcgctgcagatggacatcaaggtcgcgggcatcacgccc
gagatcatggagcaggccctggcccaggccaaggacggtcgtctgcacatcctgtcggaa
atggccaacgccctgaccgcaggccggaccgagttcagcgcccatgcgccgcgcatcgag
acgatgcagattccgaccgacaagatccgcgaagtgatcggttcgggcggcaaggtcatc
cgcgagatcgtcgaggtttcgggtgccaaggtcgacatcaacgacgacggcatcatcaag
atcgcgtcggccaacgccgattcgatcaagaaggcctatgacatgatctattcgatcgtg
gccgagccggaagagggcaaggtctataccggcaaggtcgtcaagctggtcgacttcggc
gccttcgtgaacttcttcggcaagcgggacgggctggtgcatgtcagccagatcgccaac
cgccgtctgggtcaccccaatgagatcctgaaagagggccaggaggtccgcgtcaagctg
ctgggctttgacgaccgtggcaaggtccgccttggcatgaagatggtcgatcaggagacc
ggggccgagatcgaggaaaagcaggagcagtcggccgaaggctga
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