Pseudoalteromonas arctica: PARC_b0046
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Entry
PARC_b0046 CDS
T05179
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
part
Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:
part00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_b0046 (sbcD)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PARC_b0046 (sbcD)
Archaeal homologous recombinant proteins
PARC_b0046 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ATC88301
UniProt:
A0A290SBR4
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Position
II:49210..50457
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRVEHQAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE
NQLYQFIKDAKKACPLLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDVATPDETVI
TINTNGKRAVIVAMPFLRASDVSLLSQTESGPSYAQGVSKAYELALEQATNINEQNSPLI
VMGHLHAKGGHISSDSERNLVIGGEESISANVFGKQANYVALGHLHKAQQVAKSDVIRYS
GTPIPMSFSERNYTHQVNVVEFIIDEKQHISTTVNPLYIPRSADVIILPKGECVPLSELC
EQIKALDTAQNTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIKFCGIERVREQSAQNDD
NTVFEDLSEVEMLNPLNLLEQAFANDKDMAGQSVPDELKALLSDVINELTEQEQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctccacacctcagattggcaccttggccaacaattttacgaacacgatcgc
cgtgttgaacatcaagctttttttacatggttattagccactcttgttgaacaacaaata
gacttacttttagttgcaggcgatatttatcatacagcgactccaagtgctagcgccgaa
aatcagctttatcaatttattaaagacgccaaaaaagcatgcccactattacatgtagtg
attattgcgggtaaccacgactctgcaaatcgtattttggcagctcagccattacttgca
cagtttgatactcacgtagtcgggcgctttgatgtagcaacacccgatgaaactgttatt
accataaataccaatggtaaacgcgctgtaatcgtcgctatgccatttttacgcgcaagc
gatgtaagtttacttagccaaaccgaaagcggccctagttatgcacaaggcgtttcaaaa
gcttatgaacttgcactagagcaagctactaatataaacgagcaaaactcaccattaata
gttatggggcatttacacgcaaagggcgggcacatttcaagtgattctgagcgtaactta
gtaataggtggtgaagagtctatttcagccaatgtatttggtaaacaagccaactacgtt
gctcttgggcacttacacaaagcgcaacaagtcgctaaaagtgatgttattcgctacagc
ggcacacctatccctatgtcgttttcagaacgtaactacacgcaccaagtaaatgttgtt
gagtttattattgatgaaaaacaacatattagtacaactgtaaaccccctttacattccg
cgctctgccgatgtaattattttaccaaaaggggagtgtgtaccattaagcgaactatgc
gagcaaattaaagcgctcgacactgcacaaaatacaatagcgccttatttacgtgtaaag
cttaaatcaagcgataccgacaccaccttcagagaacaaatagaacaagcacttgaaggt
aagcatattaaattttgtggtattgaacgtgtacgtgagcaatcagcgcaaaatgacgac
aacaccgtatttgaagatttaagcgaagttgaaatgctcaatccactaaacctattagaa
caagcgttcgcaaacgataaagacatggcagggcaaagcgtacccgatgagctaaaagca
cttttaagtgacgtgataaacgagcttacggagcaagaacaactatga
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