Paracoccus jeotgali: CYR75_07485
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Entry
CYR75_07485 CDS
T05276
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
paru
Paracoccus jeotgali
Pathway
paru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paru00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CYR75_07485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paru03021
]
CYR75_07485
Transcription machinery [BR:
paru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYR75_07485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AUM74132
UniProt:
A0A2K9MF63
LinkDB
All DBs
Position
complement(1525753..1527714)
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AA seq
653 aa
AA seq
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MAAKDDDTSRDDSQDNAHSLDISQAAVKKMIAEAKERGFITYDQLNAALPPDQVSSDQIE
DVMSMLSEMGIQVVENEEEGDEPEGGEVATTAGSREVTVATTETEKLDRTDDPVRMYLRE
MGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTFKAITMWRQELLDEDILLRDVIDL
DATFGQAMEEEAEEELAANAASPNKPEREQETDADGNPLPDDDEDEDDGQNLSLAAMEAS
LKPQVLETLEAIALDYEKLADMQDQRMSATLNEDGSFSAGAEDAYQKLRSEIVTLVNSLH
LHNNRIEALVDQLYGINRRIVTIDSGMVKLADAARINRREFIDAYRGAELDPTWVERMSA
NKGRGWQALFERSLDKVEALRGDMAEVGQYVGVDIEEFRRIVNQVQRGEREARQAKKEMV
EANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
RSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKI
AKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLSSLTPREERVLR
MRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggacgacgatacctcccgcgacgacagccaggacaacgcacattctctg
gatatctctcaggcggcggtcaagaagatgatcgccgaggcgaaagagcgtggcttcatc
acctatgaccagctgaacgcggccttgccccccgatcaggtcagttccgaccagatcgag
gatgtgatgtcgatgctgtccgaaatgggcatccaggtcgtcgagaacgaggaagagggc
gacgagcccgaaggcggcgaggtggccaccaccgccggctctcgcgaggtcaccgtcgcc
accaccgagaccgaaaagctggaccgcaccgacgacccggtgcggatgtatctgcgcgag
atgggcagcgtcgagctgctgtcgcgcgagggcgagatcgccatcgccaagcggatcgag
gccggtcggaacacgatgatcctcgggctgtgcgaaagcccgctgaccttcaaggccatc
accatgtggcggcaagagctgctggacgaagacatcctgctgcgcgacgtcatcgacctc
gacgcgactttcggtcaggccatggaggaagaggccgaggaagagctggcagcgaacgcg
gcgtcccccaacaagcccgagcgcgagcaggaaaccgatgccgacggcaaccctctgccc
gatgatgacgaggacgaggatgacggccagaacctgtcgctggccgcgatggaggcgagc
ctcaagccgcaggtgctggaaacgctggaagccattgcgctcgactacgaaaagctggcc
gacatgcaggatcagcgcatgtccgcgacgctgaacgaggatggcagcttttccgccggg
gccgaggacgcatatcagaagctgcgcagcgagatcgtgacgctggtcaactcgctgcat
ctgcacaacaaccgcatcgaggcgctggtcgaccagctttacggcatcaaccgccggatc
gtcaccatcgacagcggcatggtcaagctggccgacgccgcccgcatcaaccggcgcgag
ttcatcgacgcctatcgcggcgccgagcttgacccgacctgggtcgagcggatgtcagcc
aacaagggccgcggctggcaggcgctgttcgaacgcagcctcgacaaggtcgaggcgctg
cgcggcgacatggccgaggtcggccagtatgtcggcgtcgatatcgaggaattccgccgc
atcgtgaaccaggtgcagcgcggcgaacgcgaggcccgtcaggcgaaaaaggaaatggtc
gaggcgaacctgcgtctggtcatctcgatcgccaagaaatacacgaacaggggcctgcaa
ttccttgatctcattcaggaaggcaatatcggcctgatgaaggccgtggacaagttcgaa
taccgccgcggctacaagttctcaacctatgcgacctggtggatccgtcaggcgatcacg
cggtccatcgcggatcaggcccgcaccatccgcatcccggtccacatgatcgagacgatc
aacaagctggtccgcaccggccgccagatgctgcacgagatcggccgcgagccgacgccc
gaggaactggccgaaaagctgcagatgccgctggaaaaggttcgcaaggtgatgaaaatc
gccaaggaaccgatcagcctcgaaactcccatcggggacgaggaagacagccagctgggc
gatttcatcgaggacaagaacgcggttctgccgctggattccgcgattcaggaaaacctg
aaggaaaccacgacccgcgtgctgtcgtcgctgaccccgcgcgaggaacgcgtgctgcgc
atgcgcttcggcatcggcatgaacaccgatcacacgctggaagaggtcggccagcagttc
agcgtgacccgcgaacgcatccgccagatcgaggccaaggccctgcgcaagctcaagcat
ccgtcgcgttcgcgcaaactgcgcagcttcctcgaccagtaa
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