Paraglaciecola sp. T6c: Patl_2587
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Entry
Patl_2587 CDS
T00372
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00260
Glycine, serine and threonine metabolism
pat01100
Metabolic pathways
Module
pat_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Patl_2587
Enzymes [BR:
pat01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
Patl_2587
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Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lycopene_cycl
ApbA
DAO
TrkA_N
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABG41102
UniProt:
A0A9J9ESZ2
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Position
complement(3138869..3140539)
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AA seq
556 aa
AA seq
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MAEQTYDYIIVGAGSAGCVLANRLSEDANNQVLLLETGGSDKNIFIKMPTALSIPMNTEK
LAWQFHTEAEPYLDNRKMHCPRGKVLGGSSSINGMVYVRGHAKDFDEWQEHGAQGWDYQS
CLPYFQKAETFYLGKDAYRGDKGPLGVNNGNEMANPLYTAFIEAGKQAGYAATDDYNAAQ
QEGFGPMHMTVKDGVRSSASREYLDPVKSRKNLTIVTGALAEKVLLDGKKAVGVEYSING
NKTSAKASKEVVLSAGSIGSPHLLQLSGIGDSDTLTAAGVEVKHHLPGVGQNLQDHLEFY
FQYKCKQPITLNGKLGLISKGLIGARWLFTRKGLGATNHFESCAFIRSKPGVEWPDIQYH
FLPAAMRYDGRSAFDGHGFQVHVGHNKPKSRGAVTIKSADPTEAPKIQFNYLQHQDDIEG
FRACVRLTREIIEQSAFDDYRDDEIQPGKHIQTDEEIDAFVRQATESAYHPSCSCRMGED
AMAVVNSSTQVHGIQGLRVVDSSIFPTVPNGNLNAPTIMVAEKAADMILGKPALSQAQVT
VATSSNWQTVQRNATI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaaacttacgactacataatagtgggcgcgggctctgcagggtgtgtattg
gccaatcgcttatctgaagatgccaacaatcaagtgttgttattggaaaccggcggcagc
gataaaaacatctttatcaagatgcccactgcgctgtccattccgatgaacactgaaaaa
ctcgcttggcagtttcacaccgaagctgaaccttatttagacaatcgaaaaatgcattgc
cctaggggtaaggtgttaggtggctcgtcgtctatcaacggcatggtatacgtacgaggc
catgccaaagactttgatgagtggcaagagcacggggcacagggatgggattatcagtct
tgcttaccttactttcaaaaagcagaaacgttttacttaggtaaagatgcctaccgtggt
gataaaggccctcttggcgtcaataatggcaatgaaatggcgaaccccctctacaccgcg
tttatcgaggctggtaagcaagcgggttacgcggccaccgatgattacaatgcggcacag
caagagggttttggccccatgcacatgaccgtaaaagacggtgtgcgcagttctgcaagt
cgcgaataccttgacccggttaagtctcgcaagaacttaaccatagtcacaggtgcactt
gctgaaaaagtgctgcttgacggcaaaaaggccgttggagttgagtacagcattaacggc
aacaaaacgtcggctaaagcatcgaaagaggtggtgttaagcgcaggctccattggctct
cctcacctgttacaactttccgggatcggtgacagtgacacactcaccgccgcgggggtt
gaggtgaaacatcatttacctggcgtagggcaaaacctgcaagatcatttggagttttat
ttccaatataagtgcaagcagcccatcacgttaaacggcaaacttggccttatttctaaa
ggcttgattggcgctcgctggttatttacccgcaaaggtttaggcgccaccaatcacttt
gagtcgtgtgcgtttattcgctcaaaacccggcgtagagtggccagatattcaataccac
tttttgccggcagctatgcgttatgacgggcgaagcgcgtttgatgggcatggttttcaa
gtgcatgtgggccataacaaaccgaaaagtcgtggagcagtcacgattaaatctgccgat
ccgactgaagcaccaaaaattcagttcaattatttgcagcaccaagatgacattgaaggc
tttcgcgcctgcgtgcgcttaacgcgtgaaattatcgagcaaagcgcgtttgatgattac
cgtgatgatgaaattcagccgggtaagcacatccaaactgacgaagaaatagacgcgttc
gtgcgccaagcaactgagagtgcataccatccgtcgtgttcttgccgtatgggtgaagac
gccatggctgtggtgaattccagcactcaggtgcacggtattcaagggcttagagtggtc
gattcgtccattttccccactgtgcctaacggcaacttgaatgcccccaccattatggtg
gcagaaaaagccgcagacatgattttgggcaaacctgcacttagccaagcgcaggtaacg
gttgcgacttcaagcaattggcaaactgtgcaacgtaacgcaacgatttaa
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