KEGG   PATHWAY: maj03030
Entry
maj03030                    Pathway                                
Name
DNA replication - Metarhizium robertsii
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
maj03030  DNA replication
maj03030

Organism
Metarhizium robertsii [GN:maj]
Gene
MAA_09101  ribonuclease H1 [KO:K03469] [EC:3.1.26.4]
MAA_01806  Ribonuclease H domain protein [KO:K03469] [EC:3.1.26.4]
MAA_08671  Ribonuclease H domain protein [KO:K03469] [EC:3.1.26.4]
MAA_00386  Ribonuclease H domain protein [KO:K03469] [EC:3.1.26.4]
MAA_02994  replication factor-A protein 1 [KO:K07466]
MAA_03917  Proliferating cell nuclear antigen, PCNA [KO:K04802]
MAA_10711  hypothetical protein [KO:K10742] [EC:5.6.2.3 3.1.-.-]
MAA_04932  Rad27p/FEN-1 endonuclease-like protein [KO:K04799] [EC:3.1.-.-]
MAA_03560  DNA ligase (Polydeoxyribonucleotide synthase) [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
MAA_03589  DNA-directed DNA polymerase, family B, pol2 [KO:K02320] [EC:2.7.7.7]
MAA_09178  DNA polymerase subunit alpha B [KO:K02321]
MAA_04552  eukaryotic and archaeal DNA primase small subunit [KO:K02684] [EC:2.7.7.102]
MAA_03311  eukaryotic and archaeal DNA primase [KO:K02685]
MAA_09459  DNA polymerase family B [KO:K02327] [EC:2.7.7.7]
MAA_00130  DNA polymerase delta subunit 2 [KO:K02328]
MAA_02724  DNA polymerase subunit Cdc27 [KO:K03504]
MAA_02554  DNA polymerase delta subunit [KO:K03505]
MAA_04664  DNA polymerase epsilon, catalytic subunit A [KO:K02324] [EC:2.7.7.7]
MAA_04417  DNA polymerase alpha/epsilon, subunit B [KO:K02325] [EC:2.7.7.7]
MAA_03890  DNA polymerase epsilon subunit D [KO:K02326] [EC:2.7.7.7]
MAA_01155  Histone-fold protein [KO:K03506] [EC:2.7.7.7]
MAA_09215  DNA replication licensing factor mcm2 [KO:K02540] [EC:5.6.2.3]
MAA_05286  DNA replication licensing factor mcm3 [KO:K02541] [EC:5.6.2.3]
MAA_04206  cell division control protein 54 [KO:K02212] [EC:5.6.2.3]
MAA_09169  MCM2/3/5 family protein [KO:K02209] [EC:5.6.2.3]
MAA_02730  MCM2/3/5 family protein [KO:K02542] [EC:5.6.2.3]
MAA_05659  DNA replication licensing factor mcm7 [KO:K02210] [EC:5.6.2.3]
MAA_06454  DNA-directed RNA polymerase I subunit RPA1 [KO:K10739]
MAA_01332  replication factor A protein 3 [KO:K10740]
MAA_07632  replication factor C, subunit 1-like protein [KO:K10754]
MAA_07213  activator 1 41 kDa subunit [KO:K10755]
MAA_09420  replication factor C subunit 4 [KO:K10755]
MAA_07634  replication factor C subunit 5 [KO:K10756]
MAA_11081  Ubiquitin-conjugating enzyme/RWD-like protein [KO:K10756]
MAA_10603  hypothetical protein [KO:K10743] [EC:3.1.26.4]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   
LinkDB

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