Entry
Name
Cellular senescence - Seriola lalandi dorsalis (Yellowtail amberjack)
Description
Cellular senescence is a state of irreversible cellular arrest and can be triggered by a number of factors, such as telomere shortening, oncogene activation, irradiation, DNA damage and oxidative stress. It is characterized by enlarged flattened morphology, senescence-associated beta-galactosidase (SA-b-gal) activity, secretion of inflammatory cytokines, growth factors and matrix metalloproteinases, as part of the senescence-associated secretory phenotype (SASP). Cellular senescence is functionally associated with many biological processes including aging, tumor suppression, placental biology, embryonic development, and wound healing.
Class
Cellular Processes; Cell growth and death
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Seriola lalandi dorsalis (Yellowtail amberjack) [GN:
slal ]
Gene
111655756 smad2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
111670636 pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922 ] [EC:2.7.1.153 ]
111671654 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
111673607 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
111668884 pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922 ] [EC:2.7.1.153 ]
111651451 phosphatidylinositol 3-kinase regulatory subunit alpha-like [KO:K02649 ]
111671089 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
111670553 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
111671597 pik3r3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649 ]
111649932 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
111666834 pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649 ]
111663050 H-2 class I histocompatibility antigen, Q9 alpha chain-like isoform X1 [KO:K06751 ]
111666253 H-2 class I histocompatibility antigen, Q9 alpha chain-like isoform X1 [KO:K06751 ]
111647354 class I histocompatibility antigen, F10 alpha chain-like [KO:K06751 ]
111661204 major histocompatibility complex class I-related gene protein-like [KO:K06751 ]
111645640 major histocompatibility complex class I-related gene protein-like isoform X1 [KO:K06751 ]
111645642 H-2 class I histocompatibility antigen, Q9 alpha chain-like isoform X1 [KO:K06751 ]
111645643 class I histocompatibility antigen, F10 alpha chain-like isoform X1 [KO:K06751 ]
111645644 class I histocompatibility antigen, F10 alpha chain-like [KO:K06751 ]
111664121 major histocompatibility complex class I-related gene protein-like [KO:K06751 ]
111664195 major histocompatibility complex class I-related gene protein-like [KO:K06751 ]
111661187 HLA class I histocompatibility antigen, alpha chain F-like [KO:K06751 ]
111661201 major histocompatibility complex class I-related gene protein-like isoform X1 [KO:K06751 ]
111667859 rassf5; ras association domain-containing protein 5 isoform X1 [KO:K08015 ]
111646646 fbxw11; F-box/WD repeat-containing protein 11 isoform X1 [KO:K03362 ]
111671627 gadd45b; growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402 ]
111661237 growth arrest and DNA damage-inducible protein GADD45 alpha-like [KO:K04402 ]
111645124 growth arrest and DNA damage-inducible protein GADD45 gamma-like [KO:K04402 ]
111662605 growth arrest and DNA damage-inducible protein GADD45 alpha-like [KO:K04402 ]
111673084 growth arrest and DNA damage-inducible protein GADD45 beta-like [KO:K04402 ]
111669329 growth arrest and DNA damage-inducible protein GADD45 gamma-like [KO:K04402 ]
111669331 growth arrest and DNA damage-inducible protein GADD45 gamma-like [KO:K04402 ]
111665614 LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit-like [KO:K02580 ]
111670503 insulin-like growth factor-binding protein 3 isoform X1 [KO:K10138 ]
111652867 eukaryotic translation initiation factor 4E-binding protein 2-like [KO:K07205 ]
111658248 eukaryotic translation initiation factor 4E-binding protein 1-like isoform X1 [KO:K07205 ]
111669470 zfp36l2; mRNA decay activator protein ZFP36L2 isoform X1 [KO:K18753 ]
111670707 voltage-dependent L-type calcium channel subunit alpha-1D-like [KO:K04851 ]
111660720 voltage-dependent L-type calcium channel subunit alpha-1D-like [KO:K04851 ]
111660386 trpv4; transient receptor potential cation channel subfamily V member 4 [KO:K04973 ]
111659123 trpm7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982 ] [EC:2.7.11.1 ]
111666135 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
111646476 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
111649908 ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
111647988 serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
111658107 nfatc1; nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446 ]
111645629 nuclear factor of activated T-cells, cytoplasmic 1-like [KO:K04446 ]
111660684 nuclear factor of activated T-cells, cytoplasmic 2-like [KO:K17332 ]
111644232 nfatc2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332 ]
111659127 nfatc3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333 ]
111654253 nuclear factor of activated T-cells, cytoplasmic 3-like [KO:K17333 ]
111668383 nfatc4; nuclear factor of activated T-cells, cytoplasmic 4 [KO:K17334 ]
111653189 LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 1-like [KO:K04958 ]
111673377 itpr3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
111659977 vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
111657081 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
111665991 vdac3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041 ]
111666020 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
111658957 mcu; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858 ]
Compound
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Munoz-Espin D, Serrano M
Title
Cellular senescence: from physiology to pathology.
Journal
Reference
Authors
Childs BG, Durik M, Baker DJ, van Deursen JM
Title
Cellular senescence in aging and age-related disease: from mechanisms to therapy.
Journal
Reference
Authors
Sharpless NE, Sherr CJ
Title
Forging a signature of in vivo senescence.
Journal
Reference
Authors
Fridlyanskaya I, Alekseenko L, Nikolsky N
Title
Senescence as a general cellular response to stress: A mini-review.
Journal
Reference
Authors
Lujambio A
Title
To clear, or not to clear (senescent cells)? That is the question.
Journal
Reference
Authors
Di Mitri D, Alimonti A
Title
Non-Cell-Autonomous Regulation of Cellular Senescence in Cancer.
Journal
Reference
Authors
Francica P, Aebersold DM, Medova M
Title
Senescence as biologic endpoint following pharmacological targeting of receptor tyrosine kinases in cancer.
Journal
Reference
Authors
Bartling B
Title
Cellular senescence in normal and premature lung aging.
Journal
Reference
Authors
Munoz-Espin D, Canamero M, Maraver A, Gomez-Lopez G, Contreras J, Murillo-Cuesta S, Rodriguez-Baeza A, Varela-Nieto I, Ruberte J, Collado M, Serrano M
Title
Programmed cell senescence during mammalian embryonic development.
Journal
Reference
Authors
Herranz N, Gallage S, Gil J
Title
TORn about SASP regulation.
Journal
Reference
Authors
Martin N, Bernard D
Title
Calcium signaling and cellular senescence.
Journal
Reference
Authors
Farfariello V, Iamshanova O, Germain E, Fliniaux I, Prevarskaya N
Title
Calcium homeostasis in cancer: A focus on senescence.
Journal
Reference
Authors
McCarthy DA, Clark RR, Bartling TR, Trebak M, Melendez JA
Title
Redox control of the senescence regulator interleukin-1alpha and the secretory phenotype.
Journal
Reference
Authors
Donninger H, Schmidt ML, Mezzanotte J, Barnoud T, Clark GJ
Title
Ras signaling through RASSF proteins.
Journal
Reference
Authors
Barnoud T, Schmidt ML, Donninger H, Clark GJ
Title
The role of the NORE1A tumor suppressor in Oncogene-Induced Senescence.
Journal
Reference
Authors
Kang C, Xu Q, Martin TD, Li MZ, Demaria M, Aron L, Lu T, Yankner BA, Campisi J, Elledge SJ
Title
The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4.
Journal
Reference
Authors
Cao X, Li M
Title
A New Pathway for Senescence Regulation.
Journal
Reference
Authors
Gire V, Dulic V
Title
Senescence from G2 arrest, revisited.
Journal
Reference
Authors
Mowla SN, Lam EW, Jat PS
Title
Cellular senescence and aging: the role of B-MYB.
Journal
Reference
Authors
Yao H, Chung S, Hwang JW, Rajendrasozhan S, Sundar IK, Dean DA, McBurney MW, Guarente L, Gu W, Ronty M, Kinnula VL, Rahman I
Title
SIRT1 protects against emphysema via FOXO3-mediated reduction of premature senescence in mice.
Journal
Reference
Authors
Hwang JW, Yao H, Caito S, Sundar IK, Rahman I
Title
Redox regulation of SIRT1 in inflammation and cellular senescence.
Journal
Related pathway
KO pathway
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