Pectobacterium atrosepticum 21A: GZ59_06200
Help
Entry
GZ59_06200 CDS
T03293
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZ59_06200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pato03019
]
GZ59_06200 (pnp)
03016 Transfer RNA biogenesis [BR:
pato03016
]
GZ59_06200 (pnp)
Enzymes [BR:
pato01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GZ59_06200 (pnp)
Messenger RNA biogenesis [BR:
pato03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GZ59_06200 (pnp)
Transfer RNA biogenesis [BR:
pato03016
]
Prokaryotic type
tRNA degradation factors
GZ59_06200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
DUF2110
aRib
DUF4172
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
AIK12498
LinkDB
All DBs
Position
665960..668080
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKSAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFSGPIGVARVGYLNDQYVLNPTTDELKESRLDLVVA
GTQGAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVNVIKTDVVAALQAEDETLNAGEIQEILGNI
EKNVVRGRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVRIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANPQTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgtcacattagagaca
ggtatgatggcacgccaggcaaccgccgctgtgatggtaagcatggatgacacagcggta
ttcgttaccgttgtcggcgctaaaagcgctaaacccggccaaagtttcttcccattgacg
gttaactatcaggagcgtacctacgctgctggacgtttccccggtggttttttccgccgt
gaaggtcgtccaagtgaaggcgaaacgctgacttcccgtctgattgaccgtccgattcgc
cctctgttcccagaaggcttcctgaatgaagttcaggtgattgcgactgtggtttccgtc
aacccacaggttagccctgatatcgttgctatgattggtgcttctgcggcgctgagcctg
tctggtatcccgttcagcggccctatcggtgttgcacgcgtcggttacctgaacgaccag
tatgtcctgaacccaacgacagatgaactgaaagaaagccgtctggatctggtcgttgca
ggtacacaaggcgccgttctgatggtggaatccgaagctgaattgctgagtgaagatcag
atgctcggtgcggtggtttttggccacgagcaacagcaaatcgttatcgaaaacatcaac
tcactggttgcagaagctggcaaaccgaagtgggaatggcatgcgccagaagttaatgtt
tctttagagcagcgcgtacaggctctgtctgaagcacgtttgggtgacgcttaccgcatt
accgaaaaacaagagcgttatgcacaagttaacgttatcaaaactgacgttgttgccgct
ctgcaagccgaagatgaaacgctgaatgccggtgagatccaggaaattctgggcaacatt
gagaaaaacgttgtgcgtggccgtgtactggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggcgtactgccgcgtacccacggttct
gcattgttcacccgtggtgaaacgcaggcattggtaactgcaacgctgggtactgagcgt
gacgcgcagaatatcgatgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactgtgtcggcgaaaccggtatggttggttcgcctaagcgccgtgaa
atcggtcacggtcgtctggctaagcgcggcgtgttagctgtaatgccaaaggcgaacgaa
ttcccgtacaccgtgcgtgtggtgtctgaaatcacggaatctaacggttcttcttccatg
gcgtctgtctgcggtgcttctctggcgctgatggatgcaggtgtgccaattaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgtgctgtccgac
attctgggtgacgaagaccacctaggcgatatggacttcaaggttgctggtagccgtgaa
ggtatcaccgcgctgcaaatggatatcaagatcgaagggattactcgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcgcgtttgcacattctgggtgtgatggagcaggca
atcagcacgccgcgtggcgatatctccgaatttgcaccacgtattcacaccatcaaaatc
agtaccgataagattaaagacgtgatcggtaaaggtggttctgtgattcgtgcgctgacg
gaagaaacgggcacgactattgaaattgaagacgatggtactgtgaggattgcttcaacc
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgttgct
atcggcggcggtaaagaaggcttggtgcatatttctcagatcgcagacaagcgcgtagag
aaagtgactgactatctgcagatgggtcaggaagtgccggtcaaggttctggaagttgat
cgtcagggccgcgtgcgcttaagcatcaaagaagccaatccgcaaactcaggaagcggca
gccccgtcttctgaggaataa
DBGET
integrated database retrieval system
