Pectobacterium atrosepticum 21A: GZ59_12080
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Entry
GZ59_12080 CDS
T03293
Symbol
recR
Name
(GenBank) recombination protein
KO
K06187
recombination protein RecR
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GZ59_12080 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_12080 (recR)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GZ59_12080 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GZ59_12080 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
FYVE_2
DUF4248
Motif
Other DBs
NCBI-ProteinID:
AIK13058
LinkDB
All DBs
Position
1314065..1314670
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AA seq
201 aa
AA seq
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MQTSPLLESLMEALRCLPGVGPRSAQRMAFQLLQRNRSGGMRLAQALTQAMSEIGHCSDC
RTFTEQDVCAICSNPRRQQNGLVCVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGP
DDIGLGRLEERLQVESFNEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGE
LEMVDGTTLSHSLAGRQPFRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccagcccgcttcttgaatcattgatggaagcgctgcgctgcctgccgggcgtt
gggcccaggtcggcgcagcgtatggcgtttcaactactgcaacgtaaccgcagcggtggt
atgcgtttggcgcaggcgttgacgcaagccatgtccgaaatcgggcactgtagcgattgc
cggacattcaccgagcaggacgtttgtgcgatttgctcgaatccacgccgccagcaaaat
gggctggtttgcgttgtagaaagcccggctgatattcatgccattgaacagacggggcag
tttgctggtcgttactttgtgctaatggggcatttgtcgccgcttgatggcattggccca
gacgatattggtttggggcgattagaagagcgcctgcaagtggaatcgttcaacgaagtg
attctggctactaacccgacggtagaaggcgatgctacagcgaattatatcgctgagctc
tgtgcgcaacacggcgtgatggccagccgcattgcacacggcgttcccgttggcggtgag
ctggaaatggtcgatggcacgacgctctctcattcgctcgcgggtcgtcagcccttccgg
ttttaa
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