Pectobacterium atrosepticum 21A: GZ59_23690
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Entry
GZ59_23690 CDS
T03293
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00540
Lipopolysaccharide biosynthesis
pato01100
Metabolic pathways
pato01250
Biosynthesis of nucleotide sugars
Module
pato_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GZ59_23690 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pato01005
]
GZ59_23690 (kdsA)
Enzymes [BR:
pato01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
GZ59_23690 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pato01005
]
Lipid A
GZ59_23690 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIK14169
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Position
complement(2590173..2591027)
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AA seq
284 aa
AA seq
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MTNKVVKIGDIPVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHDSHQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQIILCDRGSNFGYDNLVVD
MLGFNVMKHASNGSPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLQQIKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagtggtcaagataggggatatccccgttgccaacgacttgccttttgtg
ctgtttggcggcatgaatgttcttgaatcacgcgatctggcgatgcgcatttgtgagcat
tacgtcacggtcacgcagaagttgggcattccttacgtgttcaaggcgtcattcgataag
gctaaccgttcttcgattcactcttaccgtggtcctggtctggaagaagggatgaaaatc
ttccaagaattgaaacagacctttggcgtaaaaattatcactgacgtacatgactcgcat
caggcgcagcccgttgctgatgtggttgatgtgatccagcttcctgcgtttttagcacgc
caaaccgatctggtggaagcgatggcgaaaaccggtgcggtgatcaacgttaaaaaaccg
cagttcgtcagccctggtcaaatgggtaacatcgtcgataagtttatcgaaggtggcaac
gatcagattattctgtgcgatcgcggcagcaatttcggttacgacaatctggttgttgat
atgttgggcttcaatgtcatgaagcacgcttccaacggctcacccgtgatttttgacgtt
acgcatgcgttacagtgccgcgacccgtttggtgcggcgtccggtggccgtcgcgggcag
gtaaccgagctggcgcgtgctggcatggcagtcggtctggcggggctatttattgaagct
caccccgatccagctaacgcgaagtgtgatggtccgtccgcgctgccgctggataaactg
gagccgttcctgcaacagatcaaagcgattgacgatctagtgaaaagcttcccagaactg
gataccagtaactaa
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