KEGG   Pectobacterium atrosepticum JG10-08: EV46_03090
Entry
EV46_03090        CDS       T03199                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
patr  Pectobacterium atrosepticum JG10-08
Pathway
patr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:patr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EV46_03090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:patr03019]
    EV46_03090
   03016 Transfer RNA biogenesis [BR:patr03016]
    EV46_03090
Enzymes [BR:patr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     EV46_03090
Messenger RNA biogenesis [BR:patr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EV46_03090
Transfer RNA biogenesis [BR:patr03016]
 Prokaryotic type
  tRNA degradation factors
   EV46_03090
SSDB
Motif
Pfam: RNase_PH PNPase S1 RNase_PH_C KH_1 S1_2 KH_2 DUF2110 aRib DUF4172 SLS1_KH2
Other DBs
NCBI-ProteinID: AIA69594
LinkDB
Position
670951..673071
AA seq 706 aa
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKSAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFSGPIGVARVGYLNDQYVLNPTTDELKESRLDLVVA
GTQGAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVNVIKTDVVAALQAEDETLNAGEIQEILGNI
EKNVVRGRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVRIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANPQTQEAAAPSSEE
NT seq 2121 nt   +upstreamnt  +downstreamnt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgtcacattagagaca
ggtatgatggcacgccaggcaaccgccgctgtgatggtaagcatggatgacacagcggta
ttcgttaccgttgtcggcgctaaaagcgctaaacccggccaaagtttcttcccattgacg
gttaactatcaggagcgtacctacgctgctggacgtttccccggtggttttttccgccgt
gaaggtcgtccaagtgaaggcgaaacgctgacttcccgtctgattgaccgtccgattcgc
cctctgttcccagaaggcttcctgaatgaagttcaggtgattgcgactgtggtttccgtc
aacccacaggttagccctgatatcgttgctatgattggtgcttctgcggcgctgagcctg
tctggtatcccgttcagcggccctatcggtgttgcacgcgtcggttacctgaacgaccag
tatgtcctgaacccaacgacagatgaactgaaagaaagccgtctggatctggtcgttgca
ggtacacaaggcgccgttctgatggtggaatccgaagctgaattgctgagtgaagatcag
atgctcggtgcggtggtttttggccacgagcaacagcaaatcgttatcgaaaacatcaac
tcactggttgcagaagctggcaaaccgaagtgggaatggcatgcgccagaagttaatgtt
tctttagagcagcgcgtacaggctctgtctgaagcacgtttgggtgacgcttaccgcatt
accgaaaaacaagagcgttatgcacaagttaacgttatcaaaactgacgttgttgccgct
ctgcaagccgaagatgaaacgctgaatgccggtgagatccaggaaattctgggcaacatt
gagaaaaacgttgtgcgtggccgtgtactggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggcgtactgccgcgtacccacggttct
gcattgttcacccgtggtgaaacgcaggcattggtaactgcaacgctgggtactgagcgt
gacgcgcagaatatcgatgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactgtgtcggcgaaaccggtatggttggttcgcctaagcgccgtgaa
atcggtcacggtcgtctggctaagcgcggcgtgttagctgtaatgccaaaggcgaacgaa
ttcccgtacaccgtgcgtgtggtgtctgaaatcacggaatctaacggttcttcttccatg
gcgtctgtctgcggtgcttctctggcgctgatggatgcaggtgtgccaattaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgtgctgtccgac
attctgggtgacgaagaccacctaggcgatatggacttcaaggttgctggtagccgtgaa
ggtatcaccgcgctgcaaatggatatcaagatcgaagggattactcgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcgcgtttgcacattctgggtgtgatggagcaggca
atcagcacgccgcgtggcgatatctccgaatttgcaccacgtattcacaccatcaaaatc
agtaccgataagattaaagacgtgatcggtaaaggtggttctgtgattcgtgcgctgacg
gaagaaacgggcacgactattgaaattgaagacgatggtactgtgaggattgcttcaacc
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgttgct
atcggcggcggtaaagaaggcttggtgcatatttctcagatcgcagacaagcgcgtagag
aaagtgactgactatctgcagatgggtcaggaagtgccggtcaaggttctggaagttgat
cgtcagggccgcgtgcgcttaagcatcaaagaagccaatccgcaaactcaggaagcggca
gccccgtcttctgaggaataa

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