Pectobacterium atrosepticum JG10-08: EV46_05160
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Entry
EV46_05160 CDS
T03199
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_05160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
patr02000
]
EV46_05160
Transporters [BR:
patr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EV46_05160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIA69986
LinkDB
All DBs
Position
complement(1131979..1133565)
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AA seq
528 aa
AA seq
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MKKNFFLSALILTSSLFGLAAQAETLTPKRGGTLNFLAEPEPPVLTSLVSTSGAVMKINA
KVIEGLLNYDFDMKPTPQLATSWSVSPDGKQYTFHLRKGVKWHDGQNFTSADVAFSILTV
KKYNSRGQGTFANVTEVKTPDPYTAILELSKPAPYLLSAFSANEAPIVPKHLYEGTNILS
NPHNTAPIGTGPFVFKEWVRGSHILYERNPNYWDSPKPYVDKLVVKIIPDAATRTIALET
GALDLGSDSPVPLSEIERIKKNPKLGIETAGYGYSPTQTRIEFNLDNPYLKNLKVRQAIA
HSINIDVLKNVVWYGYAESSPTPITPELAQFHDTTPSPYGFDIAKANKLLDEAGFPRQAN
GIRFKLVHDFMPYGDSFKRVAEYLKSSLAKVGIDVTIRSQDFATFVKRVYTDRDFDFNNG
SISNLFDPAVGVQRLYWSKTYQPGVPFGNGSHYSNPEVDRLLEQASVETDPEKRVELYKQ
FQRIIATDIPDLNLLQIKRQTIYNKRVHNVVTDIQGVNGSLADVWVDQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatttcttcttgtcagcgctgattctgacgtcttcgctcttcgggcttgcc
gcacaggcggaaacgttgacgcccaaacgcggcggcacgctgaattttctggccgagcct
gagccaccggttttaaccagcctggttagcaccagcggcgcggtgatgaagatcaacgcc
aaggtgattgaaggcctgttgaattacgatttcgatatgaagccaaccccgcaacttgcg
accagttggtcggttagcccggacggtaaacaatatacgttccacctgcgtaaaggtgtg
aaatggcatgacgggcaaaacttcacctctgcggacgtcgcgttttccattctgactgtc
aaaaaatacaattcacgcggtcaaggcacctttgccaacgtcaccgaagtgaaaacaccc
gatccgtataccgcgattcttgaactgtcaaaacccgcaccttacctgctgagcgcgttc
tccgccaacgaagcgcctatcgtgccaaaacacttatatgaaggcacaaacattctgtct
aaccctcacaataccgcaccgattggtactggcccgtttgtgttcaaggaatgggtgcgt
ggcagccatatcctttatgaacgtaacccgaactactgggacagccctaagccgtatgtc
gataaactggtagtgaagatcatccccgatgccgccactcggacgattgcgcttgaaacc
ggcgcattggatctgggaagcgattctcccgttccgctgagtgaaattgaacgcatcaag
aaaaaccccaagctgggcattgaaaccgctggctatggttacagcccgacgcaaacccgc
atcgaattcaatctggataacccttatctgaagaacctgaaggttcgtcaggctattgcg
cacagcatcaatattgatgtgttgaaaaacgtggtgtggtacggctatgcggaaagctca
ccaacgccgattacgccggagttggcgcagttccatgatacgacgccgtcaccttatggc
ttcgatattgccaaagcgaacaagctgctggacgaagcgggcttcccgcgtcaggcaaac
ggtatccgcttcaagctggtacatgacttcatgccctatggcgacagcttcaaacgcgta
gcggaatacctcaaatcgtcgctggctaaagtcggcattgacgtcaccattcgctctcag
gattttgccaccttcgttaagcgtgtttataccgaccgcgactttgatttcaacaacggc
tccatttcaaacctgttcgatcccgcggtaggcgtgcagcgcctgtactggtcaaaaacc
tatcaaccgggcgtgcctttcggcaacggatcacattacagcaacccagaagtagaccgt
ctgcttgagcaggcctcggtggaaaccgatcctgaaaaacgcgtggaattgtacaaacag
ttccaacgcatcatcgccacggatattcctgatttgaacctgctccagatcaagcgccag
acgatttacaacaagcgcgtgcataacgtcgtcacggatattcagggcgtcaacggcagc
ctcgccgacgtgtgggtggatcagtaa
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