Pectobacterium atrosepticum JG10-08: EV46_06875
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Entry
EV46_06875 CDS
T03199
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00020
Citrate cycle (TCA cycle)
patr00190
Oxidative phosphorylation
patr00650
Butanoate metabolism
patr01100
Metabolic pathways
patr01110
Biosynthesis of secondary metabolites
patr01120
Microbial metabolism in diverse environments
patr01200
Carbon metabolism
Module
patr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
patr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
patr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EV46_06875 (sdhB)
00650 Butanoate metabolism
EV46_06875 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
EV46_06875 (sdhB)
Enzymes [BR:
patr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EV46_06875 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_3
Fer4_9
Fer4
Motif
Other DBs
NCBI-ProteinID:
AIA70315
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Position
1525629..1526345
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AA seq
238 aa
AA seq
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MKVEFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVC
GSDGVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY
LLNNGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYR
FLIDSRDTETTPRLDDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLHRSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgaattttctatttatcgttataacccggatgttgatgatgctccgcggatg
caggattaccaactggaggcggaagaaggccgcgacatgatgctgctggatgcgctgatg
ttgctgaaagagcaggatccgacgctctcattccgtcgttcctgtcgcgaaggcgtctgt
ggttccgacggcgttaacatgaacggcaaaaacgggctggcctgtattacgccagtttcc
gcgttacggcgcggaaacagcaaaattgttatccgtcctttaccgggattaccggttgta
cgtgatttggtagtggacatgggacagttctatgctcaatatgagaaaataaagccttac
ctgttgaataatgggaaaaatccgccagcgcgtgaacatctgcaatcgcctgaacaacgt
gccaagctggatggattgtatgagtgcattatgtgtgcctgctgctcaacgtcttgccca
tcgttctggtggaacccagacaaatttgttgggcctgctgggttattggccgcgtaccgt
ttcctgattgacagtcgtgatacggaaactacgccacgacttgacgatctggacgatgcg
ttcagcgtcttccgctgccacggcatcatgaactgcgttagcgtttgtccgaaagggttg
aacccgaccaaggctattggtcatattaaatcgatgttgctgcaccgcagcgcgtaa
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