Propionibacterium australiense: NCTC13651_01936
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Entry
NCTC13651_01936 CDS
T06637
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paus
Propionibacterium australiense
Pathway
paus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC13651_01936 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paus03021
]
NCTC13651_01936 (rpoC)
03400 DNA repair and recombination proteins [BR:
paus03400
]
NCTC13651_01936 (rpoC)
Enzymes [BR:
paus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC13651_01936 (rpoC)
Transcription machinery [BR:
paus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC13651_01936 (rpoC)
DNA repair and recombination proteins [BR:
paus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC13651_01936 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEH91638
LinkDB
All DBs
Position
1:complement(2186534..2190424)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNTYDTLQIGLATADQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSNVRRERMGHIELRAPVTHIWYFKGVPSRLGYLLDV
APKDLEKVIYFAAYMVTSVDEEARHRDLPSLEAKVATERGQIEQRRETDLAKRMAKLEED
LATLESEEAAADVKKKVKDAAEKELKTIRDRASREIDRLDAVWERFKGLKVQDLEGDEVL
YREMKNRFGKYFEGFMGAEAVKRRLETFDLNAEAERLREVIKSGRGQRKTRALKRLKVVN
AFLENGNSPMGMVLDAVPIIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLGRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKMHQCGLPKQMALELFKPFVMKRLDDLNYAPNIKSAKRMVERQR
PQVFDVLDEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGKPIALPSHEMIIGMYYLTQDLDGLPGEGR
AFSSEAEAIMANDLGQLDLRAKCRIKMTGIVPPPAQVDRMRPDGSIILDTTLGSVILNHA
LPADYPFVDYHVGKKQLSALINDLAMKFPRPVVVETLDNLKDLGFEWGTRSGVTVSIGDV
QTPPDKPEIMATYEAKAAKIDKLYDRGAVTEEERRGELVQIWNDATAELTSAMEKNFTKT
NPIYMMVNSGARGNLTQMRQIAAMRGLVANPKGDIIERPIKSNFREGLTVLEYFISTHGG
RKGQADTALRTADSGYLTRRLVDVSQDVVIRENDCGTERGLNKVIATATEDGALIPVRML
DTSVYGRVAARDVVTDAGDVVIPAGTLFEATNVRAAIDAGITDVKVRSVLTCEAHTGACA
MCYGTSLATNRLVEVGEAVGIQAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELF
EARTPKGKAPIAEADGRVRIEETDRGRKLTIVRDDGGADVEYTLPRRARLEFEDSNRVRH
VIANGVHVGVGEQLTGGTVDPQDVLRVRGVRRVQEHLVEEVQKVYASQGSPIHDKHIEIV
IRQMLRRVTVIESGDTPMMPGELVDRQTYEAANRTAVAEGGRPAEGRPVLMGITKASLAT
DSWLSAASFQETTKVLTDASIQGKSDHLVGLKENVILGKLIPTGTGLERYRNIRVEPTAE
AKANSFQMSYDPFDYDFGSGSGAAVPLDDLDFGDLR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacacctacgacacgctccagatcggcctggccaccgccgaccagatc
cgcgagtggtcccacggcgaggtgaagaagcccgagacgatcaactaccgtacgctcaag
cccgagcgtgacggcctgttctgcgagaagatcttcgggcccacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgtgagcggtgcggcgtg
gaggtcacccgttccaatgtgcgccgtgagcgcatgggccacatcgaactgcgtgccccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcctgggctatctgctcgacgtg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtgaccagcgtcgac
gaggaggcccgccaccgcgacctgccctccctcgaggccaaggtcgccaccgagcggggc
cagatcgagcagcgccgggagaccgatctggccaagcgcatggccaagctcgaggaggac
ctcgccacgctcgagagcgaggaggcggctgccgacgtcaagaagaaggtcaaggacgcc
gccgagaaggagctcaagaccatccgtgaccgcgcgagccgcgagatcgaccggctcgac
gccgtgtgggagcgcttcaagggcctcaaggtgcaggacctcgagggcgacgaggtgctc
taccgcgagatgaagaaccgcttcggcaagtacttcgagggcttcatgggagccgaggcg
gtcaagcgccgcttggagaccttcgacctgaacgccgaggcggagaggctgcgcgaggtc
atcaagagcggcaggggccagcgcaagacgcgcgccctcaagcgcctcaaggtcgtcaac
gccttcctcgagaacggcaactcgccgatgggcatggtgctcgacgccgtcccgatcatc
cccccggacctgcgcccgatggtgcagctggacggcggtcgcttcgccacgagcgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctggggcgtctgctcgatctc
ggcgctcccgagatcatcgtgaacaacgagaagcgcatgctccaggaagccgtcgactcc
ctgttcgacaacggccgccgaggccgcccggtcaccggtccgggcaatcgtccgctcaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttctgtcatcgtcgtcggtccgcagctgaagatgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagcccttcgtcatgaagcggctg
gacgacctcaactacgcgccgaacatcaagagcgccaagcgcatggtcgagcgccagcgg
ccccaggtcttcgacgtcctcgacgaggtcatcaaggagcacccggtgctgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggcgttcgagccccagctcatcgagggcaag
gcgatccagctgcacccgctcgtctgcgctgccttcaacgccgacttcgacggcgaccag
atggccgttcacctcccgctgagcgccgaggcgcaggccgaggcccgcatcctcatgctc
agctcgaacaacatcctgaagccggccgatggcaagccgatcgccctgccgagccacgag
atgatcatcggcatgtactacctcacccaggacctcgacggcctgccgggcgaggggcgc
gccttcagcagcgaggccgaggccatcatggccaacgacctcggccagctggacctgcgc
gccaagtgcaggatcaagatgaccgggatcgtcccgccgccggcccaggtcgacaggatg
cgcccggacggttcgatcatcctcgacacgactctcggctcggtgatcctcaaccatgcg
ctgcccgccgactacccgttcgtggactaccacgtgggcaagaagcagctctcggccctc
atcaacgatctcgccatgaagttcccgcgtcccgtggtcgtcgagaccctcgacaacctc
aaggacctcggcttcgagtggggcacccgctccggtgtgacggtctcgatcggtgacgtg
cagacgcctccggacaagcccgagatcatggccacctacgaggccaaggccgccaagatc
gacaagctctacgatcgtggcgcggtcaccgaggaggagcgtcgcggtgagctcgtccag
atctggaacgacgcgacggccgagctgaccagcgcgatggagaagaacttcaccaagacg
aacccgatctacatgatggtgaactcgggtgcccgcggcaacctgacccagatgcgtcag
atcgccgcgatgcgaggcctcgtggccaacccgaagggcgacatcatcgagcggcccatc
aagtcgaacttccgcgaggggctgacggttctggagtacttcatctcaacccacggcggc
cggaaggggcaggcggacaccgcactgcggaccgcggactccggctacctcacccgtcgt
ctggtcgacgtctcccaggacgtcgtcatccgggagaacgactgcggtaccgaacgcggc
ctgaacaaggtcatcgcgacggccaccgaggacggcgcgctgatcccggtccggatgctc
gacacctccgtctacggtcgtgtcgcggcgcgcgacgtcgtcaccgatgccggtgacgtc
gtcattcccgccgggacgctgttcgaggccaccaatgtccgtgccgctatcgatgccggc
atcaccgatgtcaaggtccgctcggtcctgacctgcgaggcccacaccggcgcctgcgcg
atgtgctatggcacatcgctggccaccaaccgtctcgtcgaggtcggcgaggcggtcggt
atccaggccgcccagtccatcggcgagcccggcacccagctgacgatgcgcaccttccac
accggtggcgtggccggtgacgacatcacgcagggcctgccccgcgtggtcgagctcttc
gaggcccgcaccccgaagggcaaggccccgatcgccgaggccgatggccgggtcaggatc
gaggagaccgatcgcggtcgcaagctgacgatcgtccgcgacgacggcggcgccgacgtc
gagtacaccctgcctcgccgggcacgcctcgagttcgaggactcgaaccgggtgcgccac
gtgatcgcgaacggcgtgcacgtcggcgtgggcgagcagctcaccggcggcaccgtcgat
ccccaggacgtgctgcgcgtccgtggcgttcgccgggtgcaggagcacctggtggaggag
gtccagaaggtctacgcctcccagggctcgccgatccacgacaagcacatcgagatcgtc
atccgccagatgctgcgtcgcgtgaccgtcatcgagtcgggcgacaccccgatgatgccg
ggcgaactcgtggaccgccagacctacgaggcggccaaccgcacggcggtcgccgagggc
ggccgtcccgccgagggccgtccggtgctcatgggcatcacgaaggcctccctggcgacc
gactcctggctgagtgcggcctccttccaggagaccaccaaggtgctcaccgatgcgtcc
atccagggcaagtcggatcacctggtcggcctgaaggagaacgtcatcctcggcaagctc
atcccgaccggcaccggcctggagcgttaccgcaacatccgggtggagccgacggccgag
gccaaggccaactccttccagatgagctacgacccgttcgactacgacttcggttccggc
tccggagccgccgtcccgctcgacgacctggacttcggcgacctgcgctga
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