Pseudonocardia autotrophica: Pdca_10100
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Entry
Pdca_10100 CDS
T06156
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pdca_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_10100
Enzymes [BR:
paut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pdca_10100
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pdca_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Rpn9_C
Motif
Other DBs
NCBI-ProteinID:
BBF99800
LinkDB
All DBs
Position
1035800..1036516
Genome browser
AA seq
238 aa
AA seq
DB search
MNLALLDRQISECRACPRLVEWREQVAAEKRAAFRGQTYWGRPVPGFGPADAAMLIVGLA
PAAHGANRTGRMFTGDRSGDVLYAAMHAVGLASQPTATHAGDGLELYGVRITAPVHCAPP
ANKPTPAERDTCRTWLEQELDLLAPTVRSIMVLGGFGWQALLPVLAGAGWEIPRPRPRFG
HGASVTLRPAGPRRAPLELFGCYHVSQQNTFTGRLTPDMLERVLADAARAGGLSPAAR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgctgctggaccggcagatctccgagtgccgggcctgcccgcgcctggtc
gaatggcgcgagcaggtggccgcggagaagcgggccgcgttccgcgggcagacctactgg
ggccgcccggtgcccgggttcggcccggccgacgcggcgatgctgatcgtcgggctcgcg
ccggccgcgcacggcgccaaccgcaccggccggatgttcaccggtgaccgcagtggcgac
gtgctctacgccgcgatgcacgcggtcggcctggcctcgcagcccaccgcgacgcatgcg
ggcgacgggttggaactgtacggcgtccggatcaccgcgccggtgcactgcgcgccgccg
gcgaacaagccgacccccgccgaacgcgacacctgccggacctggctggaacaggagctg
gacctgctcgcaccgaccgtccggtcgatcatggtgctgggtggtttcggctggcaggcg
ctgttgccggtgctcgccggcgccggctgggagatcccgcgcccgcggccgcggttcggc
cacggggcgtcggtgacgctgcggcccgccggtccgcggcgcgcgccgctggagctgttc
ggctgctaccacgtgagccagcagaacaccttcaccggacgcctgaccccggacatgctg
gagcgggtgctggccgacgcagcccgggccggtgggctctcgcccgcagcgcgctag
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