Pseudonocardia autotrophica: Pdca_11420
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Entry
Pdca_11420 CDS
T06156
Symbol
rpoE_2
Name
(GenBank) RNA polymerase sigma factor SigE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paut03021
]
Pdca_11420 (rpoE_2)
Transcription machinery [BR:
paut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pdca_11420 (rpoE_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_AsnC-type
TnsD
Motif
Other DBs
NCBI-ProteinID:
BBF99932
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Position
1160698..1161336
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AA seq
212 aa
AA seq
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MPAPRDHDDAPVRDAADGTRPGEGADWTPPSWDEVVREHADRVYRLAYRLSGNQHDAEDL
TQETFIRVFRSLASYKPGTFEGWLHRITTNLFLDMVRRRARLRMEGLPEDTERLPGGGPE
PETVFAINHLDPHLQAALDELPPDFRVAVVLCDVEGLSYEEIGATLGVKLGTVRSRIHRG
RTALRASLERRRAAESEQTVAPDRGPVAELVP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcctcgtgatcacgacgacgccccggtccgggacgccgccgacggcacccgc
cccggcgagggtgccgactggaccccgcccagctgggacgaggtcgtccgggagcatgcc
gaccgcgtctaccgcctcgcctaccggctctccggcaaccagcacgacgccgaggacctc
acccaggagacgttcatccgggtgttccggtcgctggcctcctacaagccggggacgttc
gagggatggctgcaccgcatcaccacgaacctgttcctggacatggtccgccgccgcgcc
cggctgcggatggagggactgcccgaggacaccgagcggctccccggcggcggccccgag
ccggagaccgtgttcgcgatcaaccacctggacccgcacctgcaggccgcactcgacgag
ctgccgccggacttccgggtggcggtcgtcctgtgtgacgtcgagggcctgtcctacgag
gagatcggcgcgacgctcggggtgaagctgggcaccgtgcgcagccggatccaccgcggg
cggaccgcgctgcgggcgtccctggagcggcgccgggcagccgagtcggagcagacggtg
gcacccgaccgtggcccggtggcagagttggtgccgtga
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