Pseudonocardia autotrophica: Pdca_22830
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Entry
Pdca_22830 CDS
T06156
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_22830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_22830
Transporters [BR:
paut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pdca_22830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
AAA_16
oligo_HPY
SMC_N
RsgA_GTPase
AAA_33
nSTAND3
NACHT
AAA_5
Mg_chelatase
DUF87
APS_kinase
TrwB_AAD_bind
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BBG01074
LinkDB
All DBs
Position
2403492..2405150
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AA seq
552 aa
AA seq
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MAPHDRLTAPLLRVSDLSVFYSGRPYSGRASSGRPTVSGVDLELDAGGSLALIGESGSGK
STIARSVLRLLPDTGRATGRIEIDGTEVLGLPERRFRPLRGRTLGFVPQDPGSALNPVRT
IGSQGLEAAALADGAEPGGRRELVLDTLARVGLPEPRRVFDAYPHELSGGMLQRVLIGLA
VLPGPSLLVADEPTSALDVTIARHILDLLSELRESLGIGLLLITHDLAIAADRAEDLVVL
KDGSVQESGPTTQVFDRPSSVYARRLHADVPALNPDRWGGLRDAGAARLADPATPVEIEV
SQVAKTFRTGTSRVAAVDDVSFSVRRGTTHALVGESGSGKTTAIRLLLGLERPDSGRIAV
AGSELESRSPAALRELRRHLQLVYQNPFTSLDPMWKVQRLVREPLDRFRVGDRRERAERV
RAATASVGLSAELLGRRPAALSGGQRQRVAIARALVLEPDVIVFDEPTSALDVTVQAGIV
ETLLRLQAERGLTYVFVSHDLSLIRQLAHTVSVLRHGRVVEQGEVGAVFDDPQDSYTRIL
LDSVPGTERAAA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcacgaccgactgaccgccccgctgctgcgggtgtccgacctgtccgtgttc
tactccgggcggccctactccgggcgggcttcctccggacgcccgacggtgtccggtgtg
gacctcgaactggatgcgggcggctcgctcgcgctgatcggcgagtccggctccggaaag
tccaccatcgcccggtcggtgctgcggctgctgcccgacaccggccgcgcgaccggccgg
atcgagatcgacggcaccgaggtgctcgggctgcccgagcggcgcttccggccgctgcgc
ggacgcaccctcggcttcgtcccgcaggatccgggcagcgcactcaacccggtccggacg
atcggttcgcaggggctcgaggcggccgcgctcgccgacggcgccgagccgggcggccgc
cgcgagctggtgctcgacacactcgccagggtcggcctccccgaaccccgccgggtgttc
gacgcctacccgcacgagttgtccggcggcatgctgcagcgggtgctcatcgggctcgcc
gtgctgcccgggccgtcgttgctggtggccgacgagcccacctccgcgctcgacgtcacc
atcgcccggcacatcctggacctgctctccgagctgcgggagagcctcggcatcgggctg
ctgctgatcacccacgacctggcgatcgccgccgaccgggccgaggacctcgtcgtgctg
aaggacggatcggtgcaggagtcgggaccgacgacgcaggtgttcgaccggccgtcgtcg
gtctacgcgcggcggctgcacgccgacgtgcccgcgctgaacccggaccgctggggcggt
ttgcgcgacgccggtgccgcgcggctcgccgatccggcgacaccggtggagatcgaggtg
tcgcaggtcgcgaagaccttccgcaccggcacctcccgggtcgccgccgtcgacgacgtg
tcgttctccgtgcgccgcggcaccacgcacgcgctggtcggcgagtccggctccggcaag
acgaccgcgatccggttgctgctcgggctggaacgccccgactccgggcggatcgccgtc
gccggctcggagctggaatcccgctcaccggcggcgctgcgcgagctgcgcaggcacctg
caactcgtctaccagaacccgttcacctcgctggatccgatgtggaaggtgcagcggctg
gtgcgcgagccgctggaccgcttccgggtgggcgaccggcgcgagcgcgcggagcgggtg
cgggccgccacggcatcggtcgggctctccgccgagctgctcggacggcggccggcggcg
ctgtccggtgggcagcggcagcgggtcgcgatcgccagggcactggtgctcgaaccggac
gtgatcgtgttcgacgagccgacctcggcgctcgacgtgaccgtgcaggccgggatcgtc
gagacgctgctgcggctgcaggccgagcgtgggctgacctacgtgttcgtctcacacgat
ctgtcgctgatccgccagctcgcgcacaccgtgtccgtgctgcgccacggccgggtcgtc
gaacagggggaggtcggggcggtgttcgacgatccgcaggactcctacacccgcatcctg
ctcgactcggtccccggcaccgagcgggccgccgcatga
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