Pseudonocardia autotrophica: Pdca_30880
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Entry
Pdca_30880 CDS
T06156
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pdca_30880 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_30880 (ruvB)
Enzymes [BR:
paut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pdca_30880 (ruvB)
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pdca_30880 (ruvB)
RecFOR pathway proteins
Pdca_30880 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_16
AAA_5
Mg_chelatase
AAA_3
IstB_IS21
nSTAND3
AAA_14
Zeta_toxin
RNA_helicase
AAA_18
AAA_33
Resolvase
DUF815
TsaE
Rad17
Motif
Other DBs
NCBI-ProteinID:
BBG01879
LinkDB
All DBs
Position
3233310..3234371
Genome browser
AA seq
353 aa
AA seq
DB search
MTVEPGGDDTELREIDAVVHPEDLDVEASLRPRSLEEFIGQPRVREQLELVLEGARRRGD
PPDHILLSGPPGLGKTSLAMIVAQEMGAAIRLTSGPALERAGDLAAMLSNLVPGDVLFID
EIHRTARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRAGSLTGPLRD
RFGFTAHMEFYDDGELEQVLRRAAGILDIDLRPDGAQEIAGRCRGTPRVANRLLRRVRDF
AEVRADGVIRRDVARAALAVYDVDELGLDRLDRAVLSALVRSFHGGPVGISTLAVAVGED
QGTVEEVCEPYLVRAGMLARTPRGRVATPLAWSHLGLTAPADAPAGHRIDPLF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgaacccggcggggacgacaccgagctccgggagatcgacgcggtcgtgcat
cccgaggacctcgacgtcgaggcctcgctgcggccgcggtcgctggaggagttcatcggc
cagccgcgggtccgcgagcagctggagctggtgctggagggcgcccgccgtcgtggcgac
ccgccggaccacatcctgctctccggcccgcccgggctcggcaagaccagcctcgcgatg
atcgtcgcccaggagatgggcgccgcgatccggctgacctccggcccggcactggagcgg
gccggcgatctcgccgcaatgctgtcgaacctggtgcccggcgacgtgctgttcatcgac
gagatccaccgcaccgcccggcccgccgaggagatgctctacctggcgatggaggacttc
cgggtggacgtcgtcgtcggcaagggccccggtgcgacctcgatcccgctcgacgtcgcg
cccttcaccctggtcggcgccaccacccgcgccgggtcgctgaccggcccgctgcgcgac
cggttcggcttcaccgcgcacatggagttctacgacgacggcgagctggagcaggtgctg
cgccgcgccgccgggatcctcgacatcgacctgcggccggacggcgcacaggagatcgcc
ggccgctgccggggcacgccccgggtcgcgaaccggctgctgcgccgggtgcgggacttc
gccgaggtccgcgcggacggcgtgatccgccgcgacgtcgcccgcgccgcactcgccgtg
tacgacgtcgacgagctgggactggaccggctggaccgggcggtgctgagcgcactcgtc
cgctccttccacggcgggccggtcgggatctccacgctcgcggtcgcggtgggggaggac
cagggcaccgtcgaggaggtctgcgagccctatctcgtgcgggccgggatgctcgcccgc
acaccgcgcggccgggtcgccaccccgctggcgtggtcgcacctgggcctgaccgcgccc
gccgacgcgccggccgggcaccggatcgacccgctgttctga
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