KEGG   Cutibacterium acnes TypeIA2 P.acn17: TIA2EST22_06300
Entry
TIA2EST22_06300   CDS       T01654                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pav  Cutibacterium acnes TypeIA2 P.acn17
Brite
KEGG Orthology (KO) [BR:pav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pav03021]
    TIA2EST22_06300
Transcription machinery [BR:pav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TIA2EST22_06300
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 DUF134 HTH_28 GLTP HTH_Tnp_ISL3 Xre-like-HTH
Other DBs
NCBI-ProteinID: AEW81574
LinkDB
Position
complement(1348315..1348992)
AA seq 225 aa
MDRRVDASGTVDVAEETKTQRAQRFERDALEYLDQLYGAALRMTRNPADAEDVVQEAYAK
AFSSFHQFRPGTNLKAWLYRILTNTYINSYRKAQRRPQTSDDQDVEDWQIAKAASHDSNG
LRSAELEALDGLPDQQILDALDGLSDEFRQVVLLADVEGFAYKEIAEIMGTPIGTVMSRL
NRARKQLRKQLVDVAGARGIGPRAGQVDEEDLGRSAIARRAGREG
NT seq 678 nt   +upstreamnt  +downstreamnt
atggatcgtcgcgtggatgcgtcgggcaccgtcgacgtcgctgaagagacgaaaacccag
agggcgcaacgtttcgagcgtgacgccctcgaataccttgaccagctctatggcgccgcg
ctgcgcatgacccgcaacccggctgacgccgaagatgttgtccaagaggcctatgccaaa
gctttttcctcgttccaccagttccgacctggtacgaacctcaaggcttggctgtatcgc
attctgacgaatacctacatcaactcgtaccgcaaggctcagcgtcgcccccagacatca
gatgaccaggacgtcgaggattggcagatcgctaaagctgcgtcccatgacagcaacggt
ttgcggtctgccgagttggaggccctagatgggctgcctgaccagcagattctagacgct
ctggacgggttgtcggatgagttccgccaggtcgttttgctggctgatgtcgagggcttc
gcgtacaaggaaatcgctgaaatcatgggcaccccaatcgggaccgtgatgagtcggcta
aatcgtgctcgcaagcagctgcgtaaacagttggtcgacgtcgcaggcgctcgagggatc
ggtcctcgcgccgggcaagtagatgaagaggatcttggtcgttctgcgatagcccgtaga
gcaggaagggagggatga

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