Prunus avium (sweet cherry): 110744463
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Entry
110744463 CDS
T05161
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110744463
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110744463
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
110744463
NCBI-ProteinID:
XP_021800130
UniProt:
A0A6P5R567
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All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAPQEIDLIPFFFIILSFVSCSLQDIPLNKYVEEASQFGSQAYPSYFDMIDDGGNFSKDL
IKQSSDVLSLKSFDKVGGTSASVNVNDFGAEGDGETDDTEAFEKAWKVACSSNDEAVLVV
PEKIYRLKPIQFSGPCKSEVTVQILGTLKASENLSDFSQDGRHWLVFDTVRNLLVEGGGV
INGNGEQWWQNSCKINKSKPCKDAPTALIFQKCKNLRVNNLNIQDAQQIHVSFQKCMKVQ
ASNLSIIAPEKSPNTDGIHVTDTQNILITNSVIATGDDCLSIVNGCGKVQATNITCGPGH
GISIGSLGSGHSKAYVSEITVNGAILSGTTNGVRIKTWQGGSGSASNITFENIEMHNVSN
PIIIDQNYCDRKPCKEQRSAVQVENVVYKNISGTSASDVAIKFDCSKSFPCKGIVLQGIN
LQREEGKAAKALCNHVNVNSIGDVSPLCP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcaagaaattgatttaatcccattctttttcatcatcctctcttttgtttcc
tgcagtttacaagacatcccactcaacaagtatgttgaggaagcatctcaattcggttcc
caagcttatccttcatacttcgacatgatcgatgatggcggtaacttctccaaagacttg
atcaagcaaagttcagacgtcctaagtttgaagagcttcgataaagtgggtggcacttcg
gcttcggtaaatgtcaatgattttggagctgagggtgatggagaaactgatgacacagag
gcgtttgagaaggcttggaaggtcgcttgttcatctaatgatgaagctgttctggtggtg
cctgagaagatctatcgcctcaaaccaattcaattttcaggcccttgcaaatctgaagtc
acggttcagattcttggaaccttaaaagcttccgaaaatctatctgacttcagccaagat
ggtagacactggcttgtctttgacaccgtccgaaatttattggttgaaggtggtggagtc
atcaatggcaatggggaacaatggtggcaaaactcatgcaaaatcaataaatctaagccc
tgcaaggacgcaccaacggcactcatctttcagaagtgcaagaatttgagggtgaataat
ctgaacatacaagatgcgcaacaaattcatgtgtctttccagaagtgcatgaaagttcaa
gcttccaatctctcaataattgcaccagagaaaagccctaatactgatggaattcatgtc
acagatacgcaaaacatactcatcacaaactctgttatagccacaggtgatgattgtctt
tcaattgtaaatggatgcggaaaggtgcaagccacgaacattacctgtggaccaggtcat
ggaatcagtattggaagcttgggatctggacattcaaaagcttatgtttcagaaattaca
gtaaatggagctatactttctggaaccacaaatggggttaggattaagacatggcaggga
ggatccggaagtgcaagcaacatcacatttgagaacattgaaatgcacaatgtttccaac
ccgataattatcgaccaaaactactgcgacagaaaaccttgcaaagaacagagatcagca
gttcaagtggaaaatgtggtgtacaagaacattagtggaacaagtgcttcggatgttgcg
ataaaattcgattgcagcaagagcttcccttgtaaggggattgtgttgcaaggtattaat
ctccagcgcgaggaagggaaagcggctaaagcattatgcaaccatgtcaatgtgaatagc
ataggagatgtttctccactttgcccttag
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