Pseudomonas avellanae: BKM03_02040
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Entry
BKM03_02040 CDS
T05369
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00730
Thiamine metabolism
pavl01100
Metabolic pathways
pavl01240
Biosynthesis of cofactors
pavl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BKM03_02040
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BKM03_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavl03016
]
BKM03_02040
Enzymes [BR:
pavl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BKM03_02040
Transfer RNA biogenesis [BR:
pavl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BKM03_02040
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVB18193
UniProt:
A0A2S3TGL7
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All DBs
Position
394616..396070
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSPPVRKKFIRQLGKNIRTVLRELDADIVVGGVWDNLEVETRLTDPK
VLQGIRDRLSCMPGIANFLQVAEYPLGDMDDVVAKCKLHYADLLPGTMFSVRCKRAGRHD
FSSMDVEKYVGSQLRMQCGAAGIELKKPDLVVRMEIRDQRLFVVHDQHKGMGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEIDVLVTGEAISQVASQTL
PNLSLIDAATDKLVLRPLVATHKQDIVDLATEIGTADFARHMPEYCGVISVNPKTNAKRN
RVEYEEQQFDMAILEQALERAKLVSIDRVIDDLSRNIDIEEVSQALAGQVIIDIRHPDAQ
EDQPLQVPGVEIQTLPFYALNSRFKALDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccagaaatcaccatcaaaagcccgccggtgcgcaag
aaattcatccggcagctgggcaagaacattcgtaccgtgctccgtgaactggacgcggac
attgtcgtgggtggcgtatgggacaaccttgaggtcgaaacccggctgaccgaccccaaa
gtgctgcagggcatcagggatcggctgagctgcatgccggggattgccaactttctgcag
gtggccgagtacccgctgggtgacatggatgacgtggtcgccaagtgcaaactgcactac
gccgatctgctgccgggcacgatgttttcagtgcgctgcaaacgcgccggtcgccacgat
ttcagctcgatggacgtcgagaaatacgtcggcagccagttgcgcatgcaatgcggcgcg
gccggaatcgagctgaaaaagcccgatctggtcgtgcggatggaaattcgcgaccaacgg
ttgtttgttgttcatgaccagcataaaggcatgggcggctaccctttgggcgcgctggag
cagaccctggtattgatgtccggcgggttcgattcgaccgttgcggcctaccagatcatg
cgccgcggccttatggcgcacttctgcttcttcaatctgggcggtcgtgcccatgaactg
ggcgtgatggaagtcgcgcatttcatctggaagaagtacggcagttcgcagcgtgtgctg
tttgtcagcgtgcctttcgaggaagttctcggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttacgcgctgcatccgccgtggctgatcgt
cttgaaatcgacgtgctggtgacgggcgaagcgatttcacaggtcgccagccagacactg
ccgaacctgtcactgatcgacgcggccaccgacaaactggtattgcgaccgctggttgca
acccataagcaggacatcgtggacctggcgactgaaatcggcactgccgattttgcccgg
cacatgcctgagtattgcggggtgatttcggtcaacccgaagaccaacgccaagcgaaat
cgcgttgagtacgaagaacaacagttcgacatggcgattctcgagcaggcgctcgagcgc
gccaagctggtttcgatcgatcgggtcatcgacgatctgagccgcaatatcgacatcgaa
gaagtcagccaggcgctggccggccaggtcatcatcgacatccgtcacccggatgcccag
gaagaccagccgctgcaagtgcccggcgtggagatacagacgttgccgttctacgcactg
aacagccgtttcaaggcactggatgacacgcgccagtaccttttgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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