Photorhabdus asymbiotica: PAU_01115
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Entry
PAU_01115 CDS
T00941
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay00470
D-Amino acid metabolism
pay00550
Peptidoglycan biosynthesis
pay01100
Metabolic pathways
pay01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAU_01115 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAU_01115 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PAU_01115 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pay01011
]
PAU_01115 (ddlB)
Enzymes [BR:
pay01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PAU_01115 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pay01011
]
Precursor biosynthesis
Amino acid ligase
PAU_01115 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
TTL
ATPgrasp_Ter
RimK
ATP-grasp
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CAQ83207
UniProt:
C7BQ28
LinkDB
All DBs
Position
1268691..1269611
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AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLLSGHAVLAGLKEAGIDAHPIDTKDFLVTQLKEAGFEKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASSLSMDKLRTKQLWQGIGLTVSPYVAINLQ
QFEQFTDLQLQEHVADLGLPLIVKPSLEGSSVGMTKVNEISELRGALEIAFRYDADLLIE
KWLYGPEYTVAILGDTALPSIRIQPAAIFYDYDAKYWSEETKYFCPSGLSDEKEQQLAEL
ALKAYKSVGCCGWGRVDIMMDSDGVFYLLEVNTSPGMTSHSLVPMAARQAGLNFSQLVVK
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagtcgcggtattgttgggaggaacttctgctgagcgtgaagtttcactg
ttgtctggacatgccgtgctggctggattgaaagaagcaggtattgatgctcatccaatt
gatacaaaagattttcttgtaacgcaacttaaagaagcgggatttgagaaagtctttatc
gcgcttcatggtcgtggcggggaagatggtactttgcaaggcgtattagaatttttgcag
ctgccttataccggtagtggcgtgatggcttcttccttgtcgatggataaattgcgtaca
aagcagttatggcaagggataggattgacggtttcgccatatgttgcaattaatttgcag
cagtttgaacaatttactgatttgcaactccaagaacatgtagcagatttaggtttgcca
ttaattgttaagccaagtctggagggttccagtgtgggtatgactaaggttaatgagatt
tcagagttgcgtggtgcattggagatagcatttcgttatgacgctgacttgttgatagaa
aaatggctgtatggtccagaatacactgtggctattctcggtgatacggctttaccttct
attcgtattcagcccgctgctattttttatgactatgatgcaaaatattggtctgaagaa
acaaagtatttttgtccgagtggtttaagtgatgaaaaagaacaacaattggcagagtta
gcattaaaagcttataaatcagttggatgctgtggttggggccgggtagatatcatgatg
gattctgatggtgttttctatctgttggaagtgaatacatctccggggatgaccagtcat
agcttagtgccaatggcagcacgtcaagcagggttaaatttttcacagttggtagtaaag
attttggagttggctgattga
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