Pseudomonas azotoformans: AYR47_02140
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Entry
AYR47_02140 CDS
T04879
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYR47_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pazo03019
]
AYR47_02140
03016 Transfer RNA biogenesis [BR:
pazo03016
]
AYR47_02140
Enzymes [BR:
pazo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AYR47_02140
Messenger RNA biogenesis [BR:
pazo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AYR47_02140
Transfer RNA biogenesis [BR:
pazo03016
]
Prokaryotic type
tRNA degradation factors
AYR47_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AMN77197
UniProt:
A0A127HRY3
LinkDB
All DBs
Position
complement(454332..456437)
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAPQAEA
TELLGAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSSDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSIAAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgacgacgacgtgaccgtt
ctggtgaccgttgttggcgccaagaccgctgacccgagcaaaggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaaaaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgcagcccgtgttgctttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaacagaaagcgtcgagcctggacatggtcgtt
gccggtacctcggaagccgtgttgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgagttccaggctgtcatcaaggctgtc
accgagctggctgccgaagccgccaagccaacctggacctgggctccacaagccgaagcc
accgagctgctgggcgctatccgctccgagttcggcgctgccatctccgacgcctacacc
atcaccgtcaaggccgaccgttacgctcgcctgggcgagttgaaggatcaggttgtggcc
aagctgtccggtgaagaaggccagccttcctccagcgacgtcaaagcggctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacacccgcaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tccgcgctgttcacccgtggtgaaacccaggctttggtagtcgcgaccctgggcaccgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgctggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcgatcgccgccatgctgcctgctgccgac
gtattcccgtacaccatccgtgttgtgtcggaaatcaccgaatccaacggttccagctcc
atggcttccgtttgcggtgcttccctggcgctgatggacgcgggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggttaaagaaggcgagaagttcgccatcctgacc
gacatcctgggcgacgaagatcacctgggcgacatggacttcaaagtagccggtaccgcc
aaaggtgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggccagtcccgtaccgaactgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaagggcggcgcgactatccgtgcgatc
tgtgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggctgaagcagcccgtcagcgcgtcctgggcatcaccgcagaagcc
gagatcggcaagatctacgtcggtaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggttcacatctccatgctgagcgacgctcgcgtt
gagaaagtgactgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtagcagcagccaaggcttcgggc
gtttaa
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