Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1683
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Entry
PSEBR_a1683 CDS
T01472
Name
(GenBank) Putative ECF sigma factor SigX
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pba03021
]
PSEBR_a1683
Transcription machinery [BR:
pba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSEBR_a1683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AEA67889
UniProt:
F2KEH3
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All DBs
Position
2050555..2051145
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AA seq
196 aa
AA seq
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MNKPQSLSTRYDPRDLSDEELVARAHTELFHVTRAYEELMRRYQRTLFNVCARYLGNDRD
ADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLE
EASEDKAPKPEEKGGLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYK
RALDKLREKFAGIAET
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaccccaatcgctatctacgcgctacgacccccgtgatctctccgatgaggag
ttggtcgcgcgcgcgcataccgagctgtttcacgtaacgcgcgcctatgaagaattgatg
cgccgctaccagagaacattatttaacgtttgtgcacgatatcttgggaacgatcgcgat
gctgacgatgtctgtcaggaggtgatgttgaaggtgctgtatgggttgaagaacttcgag
gggaaatcgaagttcaagacctggctctacagcatcacctacaacgaatgcatcacgcag
tatcgcaaggaacggcgaaagcgtcgcttgatggacgctttgagcctggatcctctggag
gaagcgtcggaagataaggcgcccaagcccgaggagaaggggggactcgatcgctggctg
gtctatgtgaacccgatcgatcgggaaattctggtgctacgatttgtcgcagagctggaa
ttccaggagatcgcagacataatgcatatgggtttgagcgcgacaaaaatgcgttacaag
cgcgctcttgacaaattgcgtgagaaatttgcaggcattgctgaaacttaa
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