Pogonomyrmex barbatus (red harvester ant): 105427083
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Entry
105427083 CDS
T04903
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105427083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105427083
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105427083
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
HECT type E3
105427083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
105427083
NCBI-ProteinID:
XP_011636945
UniProt:
A0A6I9WY84
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MAKLRKCSTDESDLAVKRPKSSERMFCWGSTIHGELGLGGIEDENIFMPREVDFAQANDI
EQIACGQNYTVIITNDGQVYSCGNNDYGQLGYETARKKLQLIPGLDAFVFRKIACGNHHT
LAVNEWGQLFSWGCNINGQLGLNIIETTERIPRMVKALATKVVVQIACGVEHSIALTNDG
ELYAWGSNKEGQLGLGSYTVTEIKPKRITSLAAVPLAFIACGGYHTIVISKSGAVFAWGR
NNFGQLGLNDTEQKNLPCQLRTLRNARVCYAACGEDFSVFLTMDGGVFTCGAGMYGQLGH
GNNTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSAT
TPQIVLGPWSSPSGSSMTLDLHYSPLIDCVVKHIFSGGDHCFATITQRKDNIEPDDCRIL
GPTSQILTVMEEKLIECQKIPSGSPVNHELMTYLETVFKSQACINASFLVANNAHYGCSS
KHHGVDLDIAIKLFGIISELDNDTIQELIFTSIAESVIPSLVESPPDVETLRVYLTLPLY
HRFTNLSNYSSLQTPFSKIFLNLKPEANKIVGSWWNTTTPYYFERLIRMYKAVVLHFVKQ
ATQDKIVLWSESVHYALEMLSLLYKLNIYVVLLVPYETFYLPELIKHVNVIKDYLRWLDE
EDRICKHKLFFCNYPFLFDVEVKTTLLEADQAIQMESAMDEVASRALRDIIWGFLPNADF
EEYSQYLILHVSRDKIVNDTLTLLNKYDRRDLKKPLRVKFADEEAEDVGGVRKEFFMLLF
TEILDFKYGMFEENEETRIIWFRSDSLVEDEELYFLIGILCGLAIYNFIIINVPFPLVLY
KKLLGEKVGLKNVKEISPTVARSLESILEYNEPDFEEVFCLNFDVSKEVFGELKSVELIP
GGSKMTVTLKNKQQYVDLYVDYILNKSIQTQFQAFSKGFHNVCGGRVLELFHSHELMLLL
MGNENYDWEELEKNASYKEGYSKSDPTIVLFWQVFHELPLEEKKKFLLFLTGSDRVPIQG
MKAIKITIQPMSDERFLPAAHTCFNLLDLPRYQTREKLKYKLLQAIQHNQGFSLV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcagaaagtgttcaacagatgagagtgatctagcagtgaaacgtcccaaa
agtagcgaaagaatgttctgttggggtagtacaattcatggggaattgggtttgggtgga
atcgaggatgaaaatatctttatgccacgtgaggtggattttgcgcaagcaaatgatatc
gagcaaattgcatgtggacaaaattatacagtaatcattacaaacgatggtcaagtatac
tcctgtggtaataatgactatggacaacttggctacgagacggcgaggaaaaaattacaa
ttaatacctggcctggatgcatttgtatttagaaaaatagcatgtggcaatcatcatact
ctggctgtgaatgaatgggggcaacttttcagttggggttgtaatataaatggtcaacta
ggattaaatatcatcgaaaccacagagcgtataccacgcatggtaaaagcattagctaca
aaagtggtagtacagattgcgtgtggtgtggagcattcaatcgccctgaccaatgatgga
gagctgtacgcatggggtagtaataaggagggtcaactaggtttaggaagctatacggtt
accgagataaaacccaagagaattaccagtttagctgctgtaccacttgcatttattgca
tgcggtggatatcataccatagtcatatcgaaatcaggagctgtattcgcgtggggacga
aataacttcggacaattaggattaaatgatacagagcaaaaaaatttaccatgccagcta
cgtaccctgagaaacgcgagagtatgctatgcggcgtgcggtgaggatttctcggtgttt
ttaacaatggatggtggcgtgtttacatgcggtgctggtatgtacggtcaattgggtcac
gggaataatacgaatgagattttgccgcgacaagttatggaactgatgggtagtacggta
acgcaaatttcatgtggtaaaaggcatacattagctttagtgccatcgagaggaagagtt
tatgcatggggtttgggtggtgctggccaattaggcaatcgtgcttcacaaagtgctaca
acgccacaaattgtattgggaccatggtcttcgccgagtggatcatctatgacgctcgac
ttgcactacagtcctctcatcgattgcgttgtcaagcatatttttagtggaggcgatcac
tgttttgctacgattactcagagaaaagataatatagaaccagatgactgtagaatatta
ggaccgacttctcaaattcttacagtgatggaggaaaaattaatcgaatgtcaaaagatc
ccatcaggctcaccggttaatcatgaattaatgacgtatctagaaactgtgttcaaaagt
caagcgtgcataaatgcatcttttttagttgctaacaacgcgcattatggatgttcgagc
aaacatcatggagtagatcttgatattgcaataaaattattcggaattatctcagaattg
gataatgacacgattcaagaactgattttcaccagcatagccgagagtgtgataccatca
cttgttgaatctccacctgatgtggagaccttgagggtgtatttaacgttacctctgtat
catcgcttcaccaatctgtctaattatagctccttgcagacaccgttttccaagatattc
ttaaatttaaagcctgaagctaataagattgtgggttcatggtggaacacaaccacgcca
tactatttcgagagactcataagaatgtacaaagctgtggtactgcactttgtgaaacag
gcgacgcaggacaagatcgttctctggtctgaaagtgtacattatgctctggaaatgcta
tcattattgtacaaactaaatatttatgtcgttctactggtaccctacgagaccttctat
ctaccagaattaataaaacatgttaacgttatcaaggactatcttagatggttagatgaa
gaagatcgaatttgtaaacataaattattcttttgcaattatccttttttattcgatgtt
gaagtgaaaactacattgcttgaagccgatcaagctatacagatggaaagtgcgatggat
gaagtggcatcacgggccttgagagatattatatgggggtttttacctaatgcagacttc
gaggaatatagtcaatatttaatattacacgtatcacgagacaaaatagtcaacgatact
ttgactttgttaaacaaatatgatcgtagagatttgaagaaaccacttagagttaaattt
gccgacgaggaggctgaagatgtgggtggcgtcagaaaagaattttttatgcttctattt
acagagattctcgattttaaatacggcatgttcgaagaaaatgaagagacgaggataatc
tggttcagatccgattcattggtcgaggatgaagaattgtatttcttaatcggtattctc
tgtggcttggctatttacaatttcataattatcaatgtgccatttccactggtcttgtat
aagaaactgttgggagaaaaagttggattgaagaacgtcaaggaaatatcaccgacagtg
gccagaagtttagaaagtatccttgaatacaacgaaccggactttgaggaagtgttctgc
ttgaactttgacgtaagcaaagaagtatttggcgaattgaaaagcgtcgaattaatcccc
ggtggtagtaaaatgactgtaacattaaaaaataagcagcagtacgtggatctttacgtg
gattatatattgaataaatcaattcaaacgcagttccaagcattttccaagggttttcat
aacgtctgcggtggtagagtgttggagttatttcacagtcacgagttgatgttacttcta
atgggcaatgagaattacgattgggaggaattagaaaagaatgcttcttacaaagaaggc
tattcaaaaagtgatcctactatcgtactcttctggcaagtctttcacgagttaccatta
gaagaaaagaagaaatttctacttttcttaacgggcagcgatagagtaccgatacagggc
atgaaagctataaagataacgattcagccgatgagtgatgagcgtttcctaccagccgcg
catacttgtttcaatctacttgatctgccacgttatcaaactcgcgaaaaattaaaatat
aaattgctgcaagctatccaacataatcaaggattttcccttgtgtga
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integrated database retrieval system
