Pogonomyrmex barbatus (red harvester ant): 105431207
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Entry
105431207 CDS
T04903
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105431207
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105431207
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105431207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
T2SSE
AAA_19
UvrD-helicase
Helicase_PWI
DUF1002
Motif
Other DBs
NCBI-GeneID:
105431207
NCBI-ProteinID:
XP_011643547
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MVHLLMLRNLVQQALANDSPDVIDEFTVYALRLLIEEKDLSQKKFDILGQKSGHLTFQNA
KAIMQIVTKIQTECYEEVIELLSESKENINAPSSQIFGADIPYNPAKTIWPETVKLHNMS
TEKIDSNIDKFTKMINDTKPSIQKKSVFDKATFTKGLKECYKEYSIEMSHADFMKIIIDK
LKTSQNIQTELFDMLGCEHLEFIEYIIEHQKSIVSTYSCPKVIKRPQTITTMQQGPIISG
QVTVQSEVEKQLCKQVRKEEKKFNRMASKRDAKLEAEEGEFEPLELQVKRHEVFKAMHTP
LFSKKSILERGTQEQFPFVFDSKASVKRENVISGQKLLLAEDVRRNDSERWEEVHIPISK
QETIDINIESVLISSLDEIGQMAFNGITSLNRIQSIVFDAAYNTNENLLICAPTGAGKTN
VAMLTVVHQLKQNIQDGQLQKSQFKIIYIAPMKALAAEMTSNFNQKLGSLGVCVRELTGD
MQLTKQEIQETQMIVTTPEKWDVVTRKGTGDICLTSIVRLLIIDEVHLLHGDRGPVVEAL
VARTLRQVESSQSMIRIVGLSATLPNYVDVARFLRVNPRKGLFYFDHRFRPVPLSQTFIG
VKAIKPLQQMTDMDLACYENVIEMVRQGHQVMVFVHARNATVRMANVLKELALKNDTLKY
FISDGQTKHINKAFAKSRNKYLGELFNSGLSVHHAGLLRSDRNLVEKYFSDGLIKVLVCT
ATLAWGVNLPAHAVVIRGTEIYDSKHGSFVDLGILDVLQIFGRAGRPQFDKSGHAVIITS
HNKLSHYLSLLTNQIPIESSFITYLADNLNAEIALGTISNVTEAVEWLSYTYLFVRMKLN
FQAYGMVYQDLMDDFNLEKRRKELIDVAAKSLDKAQMIRYDGRTGDLNTTDLGRIASHYY
LKYDTVEIFNELQKPIMTETEILAMISRAQEFEQLKVRDDEMNELDELMQECELIPQGGV
ENVHGKVNILLQTYLSRGRVNTASLISDQAYVTQNAVRIARALFEIMLRRNNAIMAGRLL
QIAKMFEAQQWDFLTPLRQFDCISMEVIGKIEERNLAIYRLQEMDVKEIGIILRDQRAAA
VVKKCCDELPALDMEYTLQPITRTILRIRLKLIPIFRWNDKVHGKTSQAFWIWIEDPDSN
FIYHHEYFILTRKMVYQHLEQELVVTIPLSESLPTQYLVRIMSDHWLSCETTFPLTFHDL
ILPETHPPHTDLLSLQPLPVTVLKDPDLESLYNFSHFNPIQTQIFHCLYHTDNNVLLGAP
TGSGKTIAAEIAMFRVFKQHPDQKIVYIAPLKALVRERINDWKIRLEQRLGKRVVELTGD
VSPDIKIIAGASVIVTTPEKWDGISRSWQTRSYVKKVALIVIDEIHLLGEDRGPVLEVII
SRTNFISSHTHNKVRVVGLSTALANAQDLANWLGIKEMGLYNFRPAVRPVPLEVHISGFP
GKHYCPRMATMNRPTFQAIRQHAPTSPSLVFVSSRRQTRLTALDLIAYLAAEDNPKQWLH
MPEEQMNNILENINDSNLKLTLAFGIGLHHAGLQDRDRKTVEELFVHNKIQVLITTATLA
WGVNFPAHLVVIKGTEYYDGKLKRYVDMPITDVLQMMGRAGRPQFDNSGVAVVLVHDLKK
NFYKKFLYEPFPVESSLMEVLPDHINAEIVAGTIKNKQEFLDYLTWTYYFRRLMKNPNYY
GLDVLEPECINEYLSKLVEVTVKSLMDSHCIDYDEDEQILISLPMGKIASFYYLSHNTML
MFTQSLKENLTLDQYLRILCNSHEYNELPVRHNEELLNEELAKLCRYPANDQYDSPYTKA
FLLLQAHFSRLPLPCTDYITDLKSVLDQAIRIIQAMIDTVAERGWLTSTLRIIQLFQMIV
QAQWIDESAITTLPHIRKEDLHLFSSFSIALPVLCSITFDNYNKLAKVLQGKYRTDQIRE
IHQVIKDMPRISIDLTLENSTNIRRDVNVEEKIMLKRNNDDFINVRRNEEYTLIIGLKRM
NNSKTLKAYCPLFLKGKDESWFLILGDIQKAELWALKRISGINSQQKYHQLQFTTPNSLG
PTKLTFYLISDCYIGLDQQYSIYLNVTC
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggtacatctgctaatgctgagaaatcttgtgcaacaagctttagcaaacgactcgcca
gatgtcattgatgagttcacagtttacgcattacgtttattaatcgaggagaaagattta
tcacaaaagaaatttgatatacttggtcaaaaatcagggcatttaacgttccagaatgcg
aaagctataatgcagatagtcacaaaaattcagacagaatgttacgaagaagttatagaa
ttattatcggaatccaaagagaatataaatgctccaagttcacaaatttttggtgcggat
attccttataatccagctaagactatatggcctgagactgtcaagcttcacaatatgtcc
acagagaaaatagattcaaatatcgataaatttacaaaaatgatcaatgacaccaaacct
tccatacagaagaaatcagtatttgataaagcgacatttacaaaaggattgaaagaatgt
tacaaagaatatagtatagaaatgtcacatgcggattttatgaagataataatagataag
ttaaaaacttctcaaaatatacaaacagaattgttcgatatgttaggctgtgaacattta
gaatttatcgaatatattattgaacaccaaaagagtatcgtatcgacatattcatgtcca
aaagtaatcaaaagaccgcaaactattacaactatgcagcaaggacctataatcagtggc
caagtgactgtacaatccgaagtagaaaaacagttgtgcaagcaggtacgcaaggaggaa
aaaaaatttaatagaatggcgagcaagcgagacgctaaattggaagccgaggagggagaa
tttgagccactcgaactgcaagttaagagacatgaggtatttaaggctatgcacacccca
ctattttctaaaaaaagtattctagagagagggacacaggaacagtttccatttgtattt
gattctaaagcaagcgttaagcgagagaacgttatatcggggcaaaagttattgttagcc
gaagatgttaggagaaatgatagcgaacgttgggaagaagtgcacataccaatatccaaa
caagagactattgacatcaacatagagtctgtattaatatcttctctggacgagatcggt
caaatggctttcaatggcataacgtcgttaaacaggattcaaagcatagtgtttgatgct
gcatacaataccaacgaaaacctattgatttgtgctccaactggagcaggaaagacaaat
gtggctatgttgactgtggtgcatcaattgaaacaaaacatccaagatgggcaattgcag
aaaagtcaatttaagataatatatattgcgcccatgaaagctctagcggcagaaatgact
agcaactttaaccaaaaacttggctctctgggtgtatgtgttcgcgagctgactggcgat
atgcaactgacgaaacaagaaatccaagagactcagatgatagtgaccacaccggaaaag
tgggatgttgtcacgagaaaaggtacgggtgatatctgtcttactagtattgtgagattg
ctcatcattgacgaagtacacttgctgcatggggacagaggacccgtggtggaggcattg
gtcgcgagaactctacgtcaagtggagtcatcgcagagcatgattaggatagttggattg
tcggctactctgccgaattatgtggacgttgcgcgatttttgcgcgtcaatccacgcaag
ggattgttttattttgatcatcgtttccgaccggtgcctctcagtcagaccttcatcggc
gtgaaggctattaaaccgctacaacaaatgaccgacatggatctcgcgtgttacgaaaac
gttatagaaatggtgcgtcaggggcatcaggtcatggtgtttgtacacgcgcgaaacgcc
actgtgaggatggcgaatgttttgaaggagctggcattaaagaacgacacgctcaagtat
tttatatctgacggacagacgaaacacataaacaaggctttcgctaagtcacgcaacaag
tatctcggcgagttgttcaacagcggactgtcggtacatcatgctggcttgttgcgctct
gacagaaatctagttgagaaatattttagcgacggtctaatcaaagtactggtatgcacc
gcaacgctagcgtggggcgtaaatttacctgcgcatgcagttgtcatacgaggaaccgag
atctacgattcgaagcatggttcgttcgtagatctgggcattctggatgtattacagatc
ttcggtcgcgccggcaggccgcaattcgacaagtcgggacacgcagtcatcatcacgtca
cacaacaagctgtctcactatctatcgttgctgacgaatcaaataccaatcgaaagtagt
tttattacatatttggccgacaatttaaatgccgagatagcgttaggtacgatatcgaat
gtgacggaagcggtcgaatggttgagctacacctatctctttgtacgaatgaaactaaac
tttcaggcgtatggtatggtctatcaagatcttatggatgattttaatcttgaaaaaagg
cgaaaggaacttattgatgttgccgccaagtcattggataaagcgcagatgatcagatac
gatggacgcaccggcgatcttaacacgactgatttgggacgtatcgcaagtcattattat
ctcaagtacgacacagtcgagattttcaacgaacttcagaagcctatcatgactgagacg
gagattctagcaatgatatcgcgcgctcaggaattcgagcagcttaaggtacgagacgac
gagatgaacgagctggacgagctgatgcaggaatgcgagctcataccacagggtggagtg
gaaaatgttcacggtaaggtcaatatactgctacaaacatatctgtccagaggtcgagta
aacacggcttcgttaatatccgatcaggcatatgtgacgcaaaacgccgtgcggatagcc
agggcgcttttcgaaatcatgctcagacgcaataatgcgataatggccgggcgattgctg
cagatagcaaagatgttcgaggcgcaacaatgggatttcttgacacccctgcgtcaattc
gattgcatctccatggaggttatcgggaagatcgaggaacggaatctcgcgatctatcgt
ttgcaagaaatggatgtgaaggagatcggtattattttgcgggatcaacgggcggcggca
gtagtaaaaaaatgctgcgatgagttgcccgcattggatatggaatacactttacaacct
attacccggaccatcctaagaatacgactcaagttaatcccgatattccgctggaatgat
aaggttcacggcaagacatcgcaagctttttggatatggatcgaggatccggatagtaac
tttatttatcatcacgaatactttatactgacgaggaagatggtttaccagcatcttgag
caagaactcgtcgtgaccataccattatccgagtctttgccgacacaatatctggtgaga
attatgagcgatcattggctcagttgcgaaactacgtttccgctgactttccatgatctc
atcctaccggaaactcacccaccgcatacggatctcctgtcattgcaaccattaccagta
actgtcctcaaggatccagaccttgagagtctgtacaacttttctcatttcaatccgata
cagacacagatcttccattgcctctatcacacggacaataacgttctccttggcgcgccg
accggctcggggaaaacgattgcggcggagatcgctatgtttcgcgttttcaaacaacac
cccgatcaaaagatcgtttacatagcgcctttaaaagctctagtcagggaacgcataaac
gactggaagatacgactagagcagcgattgggtaaacgagtggtggagctgaccggagat
gtgtcgcccgacataaagatcatagccggtgcgagcgtgatcgttacgacgcccgaaaaa
tgggacggtatcagccggagctggcaaacgcgaagctatgtaaagaaagtggcgctcata
gtgatcgatgagattcatttgctaggcgaggatcgcgggccggtactcgaggtgatcatc
tcccgtaccaatttcatatcctcgcacacgcacaataaagttagagtcgtgggtctctcg
accgcgctggccaacgcgcaagatctagctaattggcttggcatcaaagagatgggtctc
tacaatttccgaccggccgtacgacctgtaccgctggaggttcacattagtggattcccc
ggcaaacattattgtccccggatggcgaccatgaacagaccgacctttcaggcgatcagg
caacacgcgcccaccagtccttctctcgtctttgtgtcttctcgcagacagacgcgcttg
accgcactggatttgattgcctatctcgcggcggaagataatcccaaacagtggttacat
atgccggaagaacagatgaacaatattttggagaatataaatgattcgaatctaaagctc
acactcgcctttggcattggccttcatcatgccggccttcaagatagagatagaaaaact
gtggaggagctatttgtccataataagatacaggtactaatcactacggccactttggcc
tggggcgttaatttccctgctcatctagtggtgataaagggtacagaatattacgatggc
aagttgaagcgttatgtagatatgccaataacagatgttctccaaatgatgggtcgcgct
ggcagaccgcaattcgataattctggtgtagcggttgttctcgtgcacgacctgaagaag
aatttctacaaaaaatttttatacgaaccgtttcccgtggaatcaagtctgatggaagtg
ttacccgatcacattaacgccgagattgtcgcaggcactattaagaacaaacaagaattt
cttgattacttaacgtggacatactattttcgaagattgatgaaaaatccaaactattat
ggtttagatgtcttggaacctgaatgtatcaacgagtatctctcgaaattagtagaagtc
accgtaaagtcattaatggattcacattgtatcgattacgacgaggatgagcaaatttta
atttcattgcccatgggtaagatagcgtcattttattatctgtcgcacaatacgatgttg
atgtttacgcaatcgttgaaggaaaatttaaccttggatcagtacttacgtatactctgc
aattctcacgaatacaacgaattacctgtgagacataacgaagaattgttaaatgaagaa
ttggcgaaactatgccgttatcctgccaatgatcaatacgattctccatatacaaaagca
tttcttttgctgcaagcgcatttttcaaggctgccattaccttgcaccgactatatcacc
gatctgaaatcagtactcgatcaagcaatcagaataatacaggcaatgattgatacggtc
gcggaacgcggatggttgacgagcacattgagaataatacaactgtttcaaatgatcgtg
caagcgcaatggatagatgaatctgcaattacaacgttaccacacataaggaaagaagat
ttgcacttgttttcatcattctcaatagctcttccggtattatgttctattacgttcgat
aattataataaacttgcaaaggttttacaaggaaaatatcggacagatcaaatacgcgag
atacatcaagtaattaaggatatgccgagaatatcaattgatttaacattagaaaattct
acaaacattagaagagacgttaacgtagaggagaagataatgttgaaacgtaataatgat
gatttcataaatgttcgacggaatgaagaatatacattaattattgggttaaaaagaatg
aacaattccaaaactttaaaagcatactgtccattgtttttaaaaggaaaggacgaaagt
tggttcttgatattaggtgacattcagaaggcagagttgtgggctttgaagaggatatct
ggtataaatagtcagcagaagtatcatcaattgcaatttactacacctaatagcttagga
ccgacaaaattaacattctatttgatttctgactgctatataggattggatcaacaatat
agcatatatctaaacgtaacatgctaa
DBGET
integrated database retrieval system
