Pseudomonas brassicacearum DF41: CD58_08245
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Entry
CD58_08245 CDS
T03174
Name
(GenBank) ATPase AAA
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02020
Two-component system
pbc02025
Biofilm formation - Pseudomonas aeruginosa
pbc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD58_08245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_08245
09142 Cell motility
02040 Flagellar assembly
CD58_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_08245
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pbc02035
]
CD58_08245
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD58_08245
Bacterial motility proteins [BR:
pbc02035
]
Flagellar system
Flagellar assembly proteins
Others
CD58_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHL32883
UniProt:
W8PGH6
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All DBs
Position
1821411..1822886
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPATLLGLLKTLSTWDEFLPVLLMGENSSIDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLETMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVTELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPD
FTANALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctcctgatcgatgacgatagcgtccgccgccgcgacttg
gcggtgatcttaaattttcttggcgaagaaaatttaccctgcggaagccatgactggcag
caggccgtcggctctttgtcgtccagtcgtgaagtcatttgtgtcctgattgggaccgtc
aatgcgcccgcgactcttttgggcttgttaaagacactctcgacctgggatgagttcctt
ccggttttgttaatgggcgaaaattcttccattgacttgcctgaagaccagcgccggcgg
gtactttcgaccctcgaaatgccgcccagctacagcaaattgctggattcgctgcaccgc
gcccaggtttatcgcgagatgtacgaccaggcccgcgagcgcggcaggcatcgcgaaccc
aatcttttccgcagccttgtcggcaccagccgggcgatccagcacgtgcgccagatgatg
cagcaggtggccgataccgacgccagcgtgttgatccttggcgaatcgggcaccggtaag
gaagtggttgcgcgcaacctgcattaccactccaagcgtcgcgaagcgcccttcgtgccg
gtcaactgcggtgcgattcctgccgagttgctggagagcgagctgtttggccacgagaag
ggcgccttcaccggcgcaatcactagccgggccgggcgtttcgagctggctaacggcggc
acgctgttcctcgatgaaatcggcgacatgccgttgccgatgcaggtcaagctgctgcgg
gtcctgcaagaacgtacttttgaacgcgtgggcagtaacaagacccagagcgtcgacgta
cggatcatcgccgcgacccacaagaatctcgaaaccatgatcgagatcggcagtttccgt
gaagacctctattaccgcctcaacgtattcccgattgaaatggcgccgctgcgtgagcgg
gtcgaagacattccgctgctgatgaatgagctgatttcgcgcatggagcacgaaaagcgc
ggttcgatccgcttcaactcggcggcgatcatgtccctctgtcgtcatggctggccgggc
aacgtccgtgagctggccaacttggtggagcgcatggcgatcatgcatccgtacggggtg
atcggcgtgactgaattgccgaaaaaattccgctacgtcgatgacgaagacgagcaaatg
gtcgacagcctgcgcagcgatctggaagagcgggtggccatcaacggccatacgccggat
ttcaccgccaatgccttgctgccgccggaaggcctggacctcaaggactatctgggcggc
ctggagcaagggctcatccagcaggccttggacgatgccaacggtatcgtggcccgtgcg
gcggaacgcctgcgcatccgtcgtaccaccctggtggagaagatgcgcaagtacggcatg
agccgtcgcgaaggagatgaacaggcggatgattga
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