Pseudomonas brassicacearum DF41: CD58_17135
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Entry
CD58_17135 CDS
T03174
Name
(GenBank) LuxR family transcriptional regulator
KO
K18304
LuxR family transcriptional regulator, quorum-sensing system regulator LasR
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02024
Quorum sensing
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_17135
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_17135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_17135
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pbc01504
]
CD58_17135
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CD58_17135
Antimicrobial resistance genes [BR:
pbc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
CD58_17135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AHL34515
UniProt:
W8QE82
LinkDB
All DBs
Position
3916001..3916795
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AA seq
264 aa
AA seq
DB search
MDKLNSPVCDRTQAGRTAPLTAFMSLAKDANRCDWERLVNKVLRQLGFGSYLISLGPVAR
RDTDPLAGLITTFPKRWLEHYRGDGLIEIDPILRHCRRELVPFFWDSERRRARGRSRHFW
QQREQHGLRSGLSIPLRYELLRGTLSVAFDDTQITEQEGFSNPAVYQLFMLIPYLLAGMR
HQLQGPAQPRQDLTPKEMDCLYWASVGKTTWEISHILTCSERTIDFHLLNARRKLGSVSR
QQAVSAAVACGLVMPTVVAPIYSC
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactcaactcccccgtctgcgaccggacccaggccgggcgtaccgcaccgctg
accgccttcatgagtctcgccaaagatgccaaccgttgcgattgggagcgtctggtcaac
aaagtactgcgccaactcggcttcggcagctacctcatcagcctgggaccggttgcacgc
cgggataccgacccgctggccggcctcatcaccacctttcccaaacgctggctggaacac
tatcgcggtgacgggctgatcgagatcgacccgatactcaggcactgtcgacgcgaactg
gtgccttttttctgggacagcgagcgcaggcgcgcccgtggacgctcccggcacttctgg
cagcaacgcgagcaacacggcctgcgcagcggcctgagcatcccgttgcgctacgagctg
ctcaggggaacactgagcgtggccttcgatgacacccagatcaccgaacaggagggtttt
tccaaccccgccgtctatcaattgttcatgctcatcccgtacctgctcgccgggatgcgc
catcaattgcaggggcctgcccaaccccgccaggacctgacgcccaaggaaatggactgc
ctgtattgggccagcgtcggcaagaccacctgggaaatcagccacatcctgacctgttcc
gaacgcaccatcgacttccacctactcaatgcccgacgcaaactcggttcagtgagtcgc
cagcaggccgtcagtgctgcggtggcctgcgggctggtcatgccgacggttgtggcgccg
atttacagctgctag
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