Paenibacillus borealis: PBOR_27545
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Entry
PBOR_27545 CDS
T03324
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pbd
Paenibacillus borealis
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_27545
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBOR_27545
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PBOR_27545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIQ60283
UniProt:
A0A089LM88
LinkDB
All DBs
Position
complement(6228213..6231791)
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AA seq
1192 aa
AA seq
DB search
MTVNFLIGRSGSGKTTTIWETVSSRLKTEPLGAPIIILVPEQGSFGTERGLLAAGNVKGS
IRAQTLSFSRLAYRVKQETGGSASLPISEEGKKMLIYKIVNRRKEELKLFGASSDRPGFV
ERLSSLHTELKRCCLGAGDLEEQLGRMRDALGGSPILAGKLEDLHLVFSELEQEMSQLYM
DQEDRLAELAEHIQHSGYIRGAEIWVDGFHGFTNQEFIVLRELMQYASGVTIALTLDRIY
QAGQAPHELELFHPAAVTYIKLRGMAEEMGLTVWDQLLAPPVLPRFKDSPALAHLERGFQ
RRMRWNGAAGQVEEAVSIRAAASRRTEVEGVLREMLSLARDSGAKYGEMAVFMRNMSDYE
PLIAPLFQDFGVPFFLDQKLNELHHPLVEFIRSALDIVRRRWRYEDVFRCVKTELLLPPD
GSITRANMDELENYVLACGIHGYRWTDGRSWKGIPRLSLEGSEAVDEAMLARMEACRSAI
TGPLQAFEQRVKASRSGLELCRAVYLLLEDTGAARKLERMGAESLEQGRPEAAREHNQLW
GAVLDLLDQIAEMMGKERMEFELFAGVLETGLAELKMGLVPPALDQVLVGTMDRTRVSGV
KYAFLLGFNEGVVPAQFKEDGILSEGERLLLENAGMELAPGSSRKLLDERFLIYNALTTA
SRKLWISYATADDEGKALLPSEIIRQLQGMFPEGLDEKYLSGFPQGGEAADESASAEAVH
MNFIGHPEQTLRMLMLQLRQWRQGVEIPGLWWDVYNWFAADRQADKALNKLAAADEQAEV
PVKLQLERLLGSLFYRNEGIRLKQETSLRLYGGPTLRGSVSRMEKFVACSFSHFASYGLR
LKERQLYKLQAPDIGQLFHAALSQMAQRLQDQGRSWGSMTAEECRREAGETVDRLSPLLQ
GEILMSSKRYSYISRKLKNIVGRASVILGEHSRRGSFEPVGLELDFGPGKELPPLRITLP
NGCVMEVVGRIDRVDMAEGEQGILLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLTY
SEQWLGQAALPAGALYFHVHDPLLTSANGMNREQAEQELMKRFKMKGLLTADREVVSLMD
TTLDKGYSSIVPVALKSDGSFYSSASVATPEQWGQLLSSVRSTISDIGTRITEGDVAIQP
YRIQQETACTFCSFRPVCQFDEAVEGNGYNNLSKPGKDVIWDLLSRKGGEKL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaactttttgatcggacgctcgggcagcggcaagacaactacaatatgggag
acggtatcctcacggctgaagacagagccgcttggagcgccgatcattatacttgtccct
gagcagggatcattcggtactgagcgcgggctgctggctgcgggtaatgtgaagggcagc
atccgcgcccagacactcagcttctcgcggctggcctacagggtgaagcaggagaccggc
ggcagcgcgagtctgccgatcagcgaagaaggcaagaagatgctgatctataagattgtc
aaccggcgcaaggaagagctgaagctgttcggcgcttcttcggaccggcccggatttgtg
gaacggctcagcagtctgcacacggagctcaagcgctgctgccttggagccggtgacctc
gaagaacagctgggcagaatgcgggatgccctgggaggaagcccgattctggccggcaag
ctggaggatctgcacctggtcttcagtgagctggagcaggaaatgtcgcagctctacatg
gatcaggaggacaggctggcggagctggccgagcatattcagcattccggctatatccgc
ggtgcagagatttgggtagacgggttccacgggtttaccaatcaggaattcatcgtactg
cgagagcttatgcaatatgcttcgggggtgaccattgccctgaccctggaccggatctat
caagcgggccaggcaccgcatgagctggagctgtttcacccggctgcggttacatatatc
aagctgcgcggaatggcagaggagatggggcttacagtctgggatcagcttctggctccg
cctgtacttccaaggttcaaggacagcccggctctcgcgcatctggagcgcggattccag
cgccggatgcgctggaatggagcagccgggcaagtggaggaagcagtcagtatccgggct
gcggcctcacgccggaccgaggtcgaaggcgtgctgcgcgagatgctgagcctggcgaga
gactcgggggccaaatacggtgagatggctgtattcatgcggaatatgagtgattatgag
ccgctgattgctccgctgttccaggacttcggcgttccgttcttcctggaccagaagctg
aatgagctgcaccatccgctggtggaattcatccgttccgctctggatatagtccgccgc
cgctggcgctacgaggatgtgttccgctgcgtgaagactgagctgctgcttccgccggac
ggaagtattacgcgcgccaatatggatgaactggagaattacgtgctggcctgcggtatt
cacgggtaccggtggactgacggccgttcatggaaaggcattccccgcctctcgctggag
ggcagtgaggccgtagatgaagctatgctggccagaatggaagcctgccggagcgcgatc
acaggaccgctgcaggcttttgagcagagagtcaaagccagccgcagcggcctggagctg
tgcagggcagtatatctgctgcttgaggacacaggggcggcgcgcaagctggaacggatg
ggagcggagtctctggagcagggacgcccggaagctgcccgtgagcataaccagctgtgg
ggtgctgtgctggacctgctcgatcagattgccgagatgatgggcaaggaaagaatggaa
tttgaactgttcgccggcgtactggaaacagggctggctgagctcaagatggggcttgtc
ccgcctgcccttgaccaggtgctggtcggaacgatggaccgtacgcgggtgtcgggagtg
aagtatgccttcctgctgggcttcaatgaaggtgtggttccggcacagttcaaggaagac
gggatcttgtccgagggagagcgtctgctgctggagaatgccggtatggagcttgccccc
ggttcatcccgcaagctgctggatgagcgcttcctgatctacaatgcgcttacgactgcc
agcaggaagctgtggattagttacgcaacggctgatgatgaaggcaaagcgttgctgccc
tcggagattatccgccagctgcagggcatgttccctgaagggctggatgagaagtatctg
tcaggattcccccagggaggggaggcagctgatgaaagcgcgtctgcggaagcggtccac
atgaattttatcggccatcctgagcaaacgctccgcatgctgatgcttcagctccggcag
tggcgccagggggtggagattccgggactgtggtgggatgtctataactggtttgcagcg
gatagacaggcagacaaggcgttgaacaaactggcagcagcagatgagcaggcagaagtc
ccggtgaagctgcagcttgaacggctgctgggctcgctgttctaccgcaacgaagggatc
aggctgaagcaggagaccagcctgcggctgtatggcggccccacactgcgcggcagcgtg
tcgcgcatggagaaatttgtcgcctgctccttctcccatttcgcctcatacgggctgagg
ctgaaggaacgccagctctacaagctgcaggctccggatatcgggcagctgttccatgcg
gctttaagccaaatggcgcagcggctgcaggaccagggccgcagctggggcagcatgacg
gcagaggaatgccgccgtgaggcgggcgagacagtagaccgtctgtctccgctgctgcag
ggcgaaattctgatgagcagcaagcgttacagttatatctcgcgcaagctgaagaatatt
gtcggccgcgcttcggtgatccttggtgagcattcgcgcagggggagcttcgagccggtc
gggctggagctggatttcggtcccgggaaggagctgcctccgctgagaattacactgccg
aacggctgcgtaatggaggtggtcggccggattgaccgtgtggatatggctgaaggcgag
cagggtattctgctgcgggtcatcgactacaaatcgagccagaaggatctcaagctgcat
gaggtctactatggattgtcgctgcaaatgctgacctatcttgatgtgctgctcacctat
tccgagcaatggcttggccaggctgcactcccggcaggcgcgctctatttccatgttcat
gatccgctgctgacctcagccaacggaatgaaccgggagcaggcggagcaggagctgatg
aagcgcttcaagatgaaaggtctgctgacggccgaccgtgaagtggtctcactgatggat
accacactcgacaaaggatattcctctattgttccggtagcgctgaagagcgacggcagc
ttctacagcagtgcgtctgttgctacgccggagcaatggggtcagctgttgtcttcagtc
cggagtacgatttcggatatcgggacgcgtattacagaaggcgatgtggccattcagcct
taccgcatccagcaggaaaccgcctgtaccttctgctccttccgtccggtctgccagttc
gacgaggctgtggagggcaacggctacaataatctgagcaagcccggcaaagatgtaatc
tgggatctgctgtcccgcaaaggaggagagaaattgtga
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