Caldimonas brevitalea: AAW51_1562
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Entry
AAW51_1562 CDS
T04216
Symbol
rng
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pbh
Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbh03019
]
AAW51_1562 (rng)
03009 Ribosome biogenesis [BR:
pbh03009
]
AAW51_1562 (rng)
Messenger RNA biogenesis [BR:
pbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAW51_1562 (rng)
Ribosome biogenesis [BR:
pbh03009
]
Prokaryotic type
rRNA processing factors
AAW51_1562 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AKJ28253
UniProt:
A0A0G3BJT1
LinkDB
All DBs
Position
1770865..1772346
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AA seq
493 aa
AA seq
DB search
MQDILINWSPQETRVAIVESGAVQELHIERTLERGLVGNIYAGRVARVLPGMQSAFIDIG
LERAAFLHVADVWQRGAFAEGGHGNHNHNNTPPTPIEKLVFEGQNLTVQVIKDPIGTKGA
RLSTQISIAGRLLVFLPQDDHIGISQKIGSPELREQLRSRMGRLAGEGGGGFILRTNAED
ATDDELAADIAFLRKMWASIRQASFKTPAGRLLHQDLNLAQRVLRDLANEETQSIRIDSH
AQFEALKAFGREYTPGSVHKLQHYRGERPIFDLFNVDQEIEKALARRVDLKSGGYLIIDQ
TEALTTFDVNTGGYVGARNFDDTIFKTNLEAAQAIARQLRLRNLGGIIILDFIDMVREDH
QEAVLAELRKQLQRDRVKMTVSGFTQLGLVEMTRKRTRESLSHMLCEPCPTCGGKGSVKT
PRSVCYDILREILREARQFNPKEFRVVASPAVVEMLLDEESAHLAALSDFIGKPISLQTE
AAVSPEQYDIVLL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcctcatcaactggtctccgcaagaaacgcgggtggccatcgtcgaaagc
ggtgcggtgcaggagttgcacatcgagcggacgctcgagcgcggcctggtcggcaacatc
tacgctggccgggtggcccgtgtgctgcctggcatgcaatcggccttcatcgacatcggc
ctcgaacgcgctgccttcctgcacgtggccgacgtctggcagcgcggtgcttttgccgag
ggcgggcacggcaaccacaaccacaacaacacgcccccgacgccgatcgaaaagctggtg
ttcgaaggccagaatctgaccgtgcaggtcatcaaggacccgatcggcaccaagggcgcg
cggctgtcgacgcagatcagcatcgcgggccgtttgctggtgttcctgccgcaggacgac
cacatcggcatttcgcagaagatcggctcgcccgagttgcgcgagcagttgcgcagccgc
atgggccggctggcgggcgagggcggcggcggcttcatcctgcgcaccaacgctgaagac
gcgaccgacgacgaactggccgccgacatcgccttcttgcgcaagatgtgggcgagcatc
cgccaggccagcttcaagacgcccgcgggccgattgctgcaccaggacctcaacctggcc
cagcgcgtgttgcgcgacctggccaacgaagagacacagtcgatccgcatcgattcgcac
gcccagttcgaggccttgaaggccttcggccgcgagtacacgccgggctcggtgcacaag
ctgcagcactaccgcggcgagcgtccgatcttcgatctgttcaacgtcgaccaggagatc
gagaaggcgctggcgcggcgcgtcgacctgaagtcgggcggttatctgatcatcgaccag
accgaagccctgaccaccttcgacgtcaacaccggcggctacgtcggcgcccgcaacttc
gacgacaccatcttcaagaccaacctcgaggcggcgcaggccatcgcccggcagctgcgg
ctgcgcaacctgggcggcatcatcatcctcgacttcatcgacatggtgcgcgaggaccac
caggaggcggtgctggccgaactgcgcaagcaactgcagcgcgaccgcgtcaagatgacg
gtgagcggcttcacgcagctcggtctggtggagatgacacgcaagcgcacgcgcgagtcg
ctgtcccacatgctgtgcgagccgtgccccacctgcggcggcaagggctcggtgaagaca
ccgcgcagcgtctgctacgacatcctgcgcgagatcctgcgcgaggcccggcagttcaac
ccgaaggagttccgggtggtggcgtcgcccgcggtggtcgagatgctgctcgacgaagag
agcgcccacctcgcggccctgtccgatttcatcggcaagccgatctcgctacagaccgaa
gccgcggtgtcgcccgagcagtacgacatcgtgttgctgtga
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