Caldimonas brevitalea: AAW51_3236
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Entry
AAW51_3236 CDS
T04216
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pbh
Caldimonas brevitalea
Pathway
pbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAW51_3236 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbh03400
]
AAW51_3236 (uvrB)
DNA repair and recombination proteins [BR:
pbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAW51_3236 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AAW51_3236 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
DUF87
FlaG
Motif
Other DBs
NCBI-ProteinID:
AKJ29927
UniProt:
A0A0G3BKL6
LinkDB
All DBs
Position
complement(3816998..3819058)
Genome browser
AA seq
686 aa
AA seq
DB search
MLDDNKFVHFPGSPFQLYQPYPPAGDQPVAIDKLVEGVQDGLSYQTLLGVTGSGKTFTMA
NVIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLYIE
KDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSDYHQMVMTMRVGDKVGQR
DVIAQLIRMQYKRNEIDFARGTFRVRGDTIDVFPAEHSELAIRIELFDDEIESLQLFDPL
TGRVRQKIPRFTVYPSSHYVTPRERVLSAIEGIKEELRTRLDELVKAGKLVEAQRLEQRT
RFDLEMLQEIGHCKGIENYTRHVSGSKPGEPPSTLVDYLPPDALMFLDESHVLIGQLGGM
YNGDRARKTTLVEYGFRLPSALDNRPLKFEEFERKMRQVMFVTATPADYEKRTAGQVVEQ
VVRPTGLVDPVVEVRPATHQVDDVLQEIRERVEVNERVLITTLTKRMAEQLTDYLSDNGV
KVRYLHSDVDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRA
ERSLIQTIGRAARNVNGKAILYADKMTDSMRRAIGETERRRAKQLEHNQAQGITPRTVTK
HVKELIDGVFSAQESRQGLKAAEEAAKVEALSEKDLGKRIKQLEKQMLEHARNLEFEKAA
RVRDQLALLKEQAFGAAGDDKIVPIG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgacaacaagttcgtgcacttccccggttcgcccttccagctttaccagccg
taccccccggcgggcgaccagccggtcgccatcgacaagctggtcgaaggtgtgcaggac
ggcctgagctaccagacgctgctgggcgtcaccgggtccggcaagaccttcacgatggcc
aacgtcatcgcgcggctgggccgcccggcgatcgtgttcgcgcccaacaagaccctggct
gcgcagctctacagcgagttccgcgagttcttcccgcgcaacgccgtcgagtatttcgtc
agctactacgactactaccagccggaagcctacgtcccgcagcgcgacctctacatcgag
aaggacagctcgatcaacgaacacatcgagcagatgcggctgtcggccaccaagagcctg
ctggagcgccgcgacgtggtgatcgtcgccacggtctccgccatctacggcatcggcaac
ccgagcgactaccaccagatggtgatgacgatgcgggtgggcgacaaggtgggtcagcgc
gacgtgatcgcccagctgatccgcatgcaatacaagcgcaacgagatcgatttcgcgcgc
ggcacgttccgggtgcgcggcgacacgatcgacgtgttcccggccgagcactccgagctg
gccatccgcatcgagctgttcgacgacgagatcgagtcgctgcagctgttcgacccgctc
accggccgcgtgcggcagaagatcccgcgcttcacggtctatccgagcagccattacgtc
acgccacgcgagcgggtgctgtcggccatcgaaggcatcaaggaggagttgcgtacccgg
ctcgacgaactggtcaaggccggcaagctggtcgaagcgcaacgcctcgaacagcgcacc
cgtttcgacctcgagatgctgcaggaaatcggccattgcaagggcatcgagaactacacc
cggcatgtgtcgggctcgaagccgggcgagccgccgtcgacattggtggactatctgccg
cccgacgcgctgatgttcctcgacgagagccatgtgttgatcggccagctcggcggcatg
tacaacggcgaccgggcccgcaagacgacgctggtggagtatggcttcaggctgccgagt
gccctcgacaaccggccgctgaagttcgaggagttcgaacgcaagatgcggcaggtgatg
ttcgtcacggcgaccccggccgactatgaaaagcgtaccgccggccaggtggtggagcag
gtggtgcggccgaccggcctggttgacccggtggtcgaggtgcggcccgcgacgcaccag
gtcgacgacgtgctgcaggagatccgcgagcgggtcgaggtcaacgagcgggtgctgatc
accacgcttaccaagcgcatggccgagcagctgaccgactacctgtccgacaacggcgtg
aaggtgcgctacctgcactcggacgtcgacaccgtcgaacgggtcgagatcctgcgcgac
ctgcgcctgggcaccttcgatgtgctggtgggcatcaacctgctgcgcgaggggctggac
atcccggaggtgtcgctggtggccatcctcgatgccgacaaggaaggtttcctgcgcgcc
gaacgctcgttgatccagaccatcgggcgcgccgcgcgcaacgtcaacggcaaagccatc
ctgtacgccgacaaaatgaccgactcgatgcggcgcgccattggcgagaccgagcgccga
cgtgccaagcagctcgagcacaaccaggcgcagggcatcacaccgcgcacggtcaccaaa
cacgtcaaggaattgatcgacggcgtgttctccgcgcaggaatcccgccagggcctgaag
gcggcggaagaagcggccaaggtcgaggccttgtcggagaaagacctgggcaagcgcatc
aagcagctcgagaagcagatgctcgaacacgcccgcaacctggagttcgagaaggcggcg
cgggtgcgcgaccaattggctctgctgaaggagcaggccttcggcgccgccggcgacgac
aagatcgttccgatcggttga
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