KEGG   Python bivittatus (Burmese python): 103050660Help
Entry
103050660         CDS       T03091                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pbi  Python bivittatus (Burmese python)
Pathway
pbi03410  Base excision repair
Module
pbi_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:pbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103050660 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbi03400]
    103050660 (LIG3)
Enzymes [BR:pbi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103050660 (LIG3)
DNA repair and recombination proteins [BR:pbi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     103050660 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 103050660
NCBI-ProteinID: XP_007436225
LinkDB All DBs
Position
Unknown
AA seq 1002 aa AA seqDB search
MPSLFAGSLCCIKLSKGNCMLLSLRAFLKAARTLSRSEKLALLPKKTRSHTGVFRFQNTG
ALPLTSLWYHQPGVSSFPLPAALHACHLTPLCTASEMAEQRYCVDYAKRGTAGCKKCKEK
ILKGMVRIGKVVPNPFTESGGDMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQE
GEKEMINQHISELSSKTANTPKKKAIIQAKISPGGQITSPKKMPLVSSDPSPKKFSGFTA
KAGTSEEIATSGSSHKPSLSAEKSDPKHKDCLLREFRKLCAMVADKSSYNVKTQIIQDFL
QKGSSGDGFRGDLYLTVKLLLPGVIKSVYNLNDKQIIKLFSRIFSCSQEDMVRDLEQGDV
SETVRIFFEQSRSCPPAAKSLLTIQEVDEFLTQLSKLSKEEEQQNLLQEIALRCTANDLK
CIIRLIKHDLKMNAGAKHVLDALDPNAFEAFKASRNLHDVVERVLKNQQESQPGMKKILS
VQAALMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKKGDHFSYFSRSLKP
VLPHKVAHFKDFIPKAFPGGHSMILDAEVLLIDTRIGKPLPFGTLGVHKKAAFQDANVCL
FVFDCIYFNDVSLMDRPLRERRRFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIRE
GLEGLVLKDVKSIYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFL
MGCYDPDSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPDWLKINKNYYPDFI
VPDPKEAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWTTSTTLPQLRELYQLS
KEKSDFLVVAAEEENSTAGSSGETEGQPKSSSPQKAAKQHSGKSPAKAKKPEVSKPVERS
PLKKTEGKRGEKRKAPELEADKRKQMLLDIFTGVKLYLPPSVEGFGKLKRYFIAYNGDLV
QEYDATSATHVMERMEDNPTAKHVSPEWIWECIRKRRLVTPC
NT seq 3009 nt NT seq  +upstreamnt  +downstreamnt
atgccgtctctcttcgcgggatctctctgctgcatcaaactaagcaaaggaaattgcatg
ctactttctctcagagcttttctgaaggcagccaggacccttagcagaagtgagaaattg
gccttgctgccaaagaagacacgcagtcacaccggtgtgttcagattccaaaacacgggt
gccttgcctttgaccagcctgtggtaccaccaacccggcgtctctagctttcccctccca
gcagctttgcatgcttgtcatctgacgcccctgtgcaccgcctctgagatggcagagcag
cggtactgcgtggactatgccaagcgaggcaccgctggctgcaagaagtgcaaagagaag
attctcaaggggatggtacgcattggaaaagtggtgcccaatcccttcactgaatctggt
ggagacatgaaggagtggtatcatgtcaagtgcatatttgagaaactggagagggctcgg
gccacaacaaagaagattgaagatatcacagatctggaaggctgggaggaactgcaggag
ggtgaaaaggagatgatcaatcagcacatctcagaactttcttccaaaactgcaaacact
ccaaagaaaaaggccatcatccaggcaaagatttctcctggtggacaaataacgtcaccc
aagaaaatgcctctggtttcttcagatccttcgccaaagaaattttcaggttttacagca
aaggcaggcacttctgaggaaatagctacctctggctcttcccacaagccaagcttgtcc
gccgagaagagtgatccaaaacacaaagactgtttgctgcgggaattcaggaagctgtgt
gcgatggtggctgacaaatccagttacaatgtcaaaactcagataattcaggactttttg
cagaagggaagcagtggagatggctttcgtggtgatctctacctaacagtaaagttactt
ttgcccggagtcattaagagtgtttacaacttgaatgacaaacagatcatcaagctcttc
agtaggatattcagctgcagccaggaagacatggttcgagacctggagcagggtgatgtt
tcggaaacggtgcggatcttttttgagcaaagcaggtcttgccctcctgctgccaagagc
cttttgacaatccaggaagttgatgagttcctgacgcagttatccaaactttccaaagaa
gaggagcaacaaaacctactgcaagagattgcactgaggtgcaccgctaatgacctgaag
tgcatcattcggctgattaagcacgacttgaaaatgaacgctggcgcgaagcatgtactt
gatgcattggaccccaatgcttttgaggctttcaaagcatcccgtaacctccatgacgtg
gtggagcgagtgctgaaaaaccagcaagagtctcagccaggcatgaagaaaattcttagt
gtccaggcagccctgatgaccccagttcagcccatgctggccgaagcttgcaaatctatt
gagtatgccatgaaaaagtgtcccaatggcatgtatgcagaaattaagtatgatggagag
cgtgtccaagtgcacaaaaagggagatcatttcagctatttcagccgcagtctgaaacca
gttctccctcacaaggtggctcattttaaggacttcatccccaaggcctttccaggaggg
cacagtatgatcttggacgctgaagttcttctgattgacaccaggatagggaagcctctg
ccttttgggaccctcggggtgcataagaaagctgctttccaagatgccaatgtctgcctt
tttgtctttgactgcatctatttcaatgatgtcagtctgatggacaggcctctgcgtgag
cgtcgcagatttctccatgataacatggtggaaatccccaaccgaattctcttttcagag
atgaagcatgtcacgaaagcctcagaccttgcagacatgatcaaccgggtcatccgcgaa
gggctggagggattagtgctgaaagatgtgaagagtatttatgaaccaggaaaacgccac
tggctcaaagtgaaaaaggactatctgaacgagggagcaatggcagacacagcagacctg
gtggttttgggtgccttctatggccaggggagcaaaggtgggatgatgtccatctttctc
atggggtgctatgatcctgacagccagaagtggtgcacagtgaccaaatgtgctggtgga
catgatgatgccacacttgcccggctgcagaaggaattggacatggtgaaaatcagcaag
gatcccagtaaaattccagactggctaaagattaataagaattattatcctgatttcatt
gttccagacccaaaggaagcaccagtctgggagatcacaggtgctgaattctctaaagca
gaggcccacactgctgatgggatctccatccgcttcccccggtgtactcgtatccgagat
gacaaagattggacgacgtccactaccctcccacaactcagggagctgtaccagttgtcc
aaagagaaatcggacttcctggtggtagctgcggaggaggagaactctacagcaggcagc
agtggagagactgagggccagcccaagtcatcttctcctcagaaggctgcaaaacaacac
tccgggaagtcccccgcaaaagccaagaagcctgaagtcagcaaaccagtagaaaggtct
ccactgaagaaaactgagggaaagagaggagaaaaaaggaaggcacccgagctggaggcg
gacaaaagaaagcagatgctactggacatattcactggggttaagctttatcttcctcct
tctgtggagggtttcgggaaactcaagcgttatttcatagcctataatggagacctggtt
caagagtatgatgctacttcagcaacccacgtgatggagaggatggaagacaacccaact
gctaagcatgtgtcccctgagtggatttgggaatgcattcgaaagagaaggctggtaact
ccctgctag

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